Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00057 ATGTGGGGCAAGATGTTCAAATCCTTAAGGAAAAGCCTAATAAGCCTTCAACATAAGTGTGTGAATAAGAAAAAGAGTGAAGTTGATAGGAGTGTGTCAGTGCCTGTGCAGTGCTGCAATTGTTGCATAGAGGAAACCAAACAATGCAATTGTGATCACATTCATGCTGCAGAAGATGCAAATGTCGTCGCTGAGCGTGATGCTAACGCCAACAGTTCCTTTACTCATGCTGTCATCAACATGGTGGGAATGCTCATAGGTTTGGGGCAACTATCAACTCCATATGCTGTAGTAAGTGGAGGGTGGGTGTCTGCATTCTTGCTTATAGGACTAGGGGTGATGTGTGCTTATAGTTCTCATATACTTGGAACATGCCTTAGAAAGAATCCAAAGTTAAGAAGCTTTGTGGATATTGGGAAGCATGCATTTGGATCAAAAGGAGGGTTGGTGGCTGCAACAATCATATACTTGGAAATCTTCCTGTCCCTTGTTTCCTACACCATCTCATTACATGATAATTTGATCACAGTCTTTCTGGGGACAAATTTGAAGCTGCACTTCCCTAAATTCTCTTCATCTCAGCTCCTAACTGTGGTGGCAGTTTTCATTGCCCTCCCTAGTTTGTGGATCAGAGACCTTTCTTCCATATCATTCCTTTCAACAGTTGGCATTCTCATGTCTCTACTCATTTTTGTGTGTGTAGCAGCCACTGCACTTTTAGGGCATGTCCCATCCAATCATGCCATACCTGTCCTCCAACTCCATAACATTCCATCAGTTTCTGGCCTTTACGTCTTCGGCTATGGAGGACATATTGTTTTCCCCGAATTATATACAGCCATGAAAGACCCCTCCAAATTTACCAAGGTTTCTGTTGCGAGTTTCGCAGTGGTTACAGCAATTTACACGACATTGGGGTTCATGGGTGCAAAGATGTTTGGTAAGGATGTAAAGTCTCAAATAACTCTTAGCATGCCGCCAGAGAAAATTGTGACAAAGATTGCTCTGTGGGCAACCGTGGTGGCACCAATGACCAAATACGCACTTGAATTCACACCTTTCGCAATTCAACTAGAACATGCACTTCCAAGTACCATGAGTGGCAGGACCAAAATGATCATTAGGGGTTGCGTAGGTTCATTTTCACTTTTGGTCATACTAACTCTTGCTCTGTCGGTTCCATACTTTGAACATGTTCTGAGTCTCAGTGGTTCCCTTGTTAGTGTTGCCGTTTGTTTAATTCTGCCATGTTCTTTCTACGTGAAGATATGTTGGGGTCAAATATCAAACCCTCTCTTGCTCCTAAATCTCTTTCTCATCACATTTGGCATTGTTCTTGCTCTTATGGGTACCATTTCCTCCTCAAAGTTGCTTCTCAAAAGTTTTCAATTGCATCACTCAAGTTGA 1407 0.4257 MWGKMFKSLRKSLISLQHKCVNKKKSEVDRSVSVPVQCCNCCIEETKQCNCDHIHAAEDANVVAERDANANSSFTHAVINMVGMLIGLGQLSTPYAVVSGGWVSAFLLIGLGVMCAYSSHILGTCLRKNPKLRSFVDIGKHAFGSKGGLVAATIIYLEIFLSLVSYTISLHDNLITVFLGTNLKLHFPKFSSSQLLTVVAVFIALPSLWIRDLSSISFLSTVGILMSLLIFVCVAATALLGHVPSNHAIPVLQLHNIPSVSGLYVFGYGGHIVFPELYTAMKDPSKFTKVSVASFAVVTAIYTTLGFMGAKMFGKDVKSQITLSMPPEKIVTKIALWATVVAPMTKYALEFTPFAIQLEHALPSTMSGRTKMIIRGCVGSFSLLVILTLALSVPYFEHVLSLSGSLVSVAVCLILPCSFYVKICWGQISNPLLLLNLFLITFGIVLALMGTISSSKLLLKSFQLHHSS* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00057 468 Pfam Transmembrane amino acid transporter protein 71 452 IPR013057 -
Lapu6g00057 468 PANTHER AMINO ACID TRANSPORTER 65 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00057 Lapu-Chr6 485987 488976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00057 39 466 Amino Acid or Auxin Permease AAAP Family AT5G16740 59.907 6.23e-169 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00057 - - gmx:100790897 753.821