Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00016 ATGAATTTAAATGCAAATGAAACGATGTTCCTCTCAATTGCCGAAGTGGGTGAAGGGAGTCAAAGGTTCCTGGTATGCCTTGATGCGCCACCCCACATTGTTTCAGATGGGTTATGGCGTAGCAGCCCACAAAATACAAGGAGTCCCATGAAATCTTTTCTCCCCTTATTTGAGTTACAAGTCCTTCTCATATTTGCCATCTCCCAAATCTGCCGTCTCCTCCTCATGCCCCTCAAACTCCCTCTCTTTATCTCACAGATGGCTGGGCTGATTCTGCAAGTTCTTTTTGCGGTGGACCCACTGGGCACGTACATGAGGGTGCTGTTTCCCTATGGAACTCACGACACCATTACAACTGTGTCGTCGATTGGTTTTGTACTTTTCGTTTTCATAAACGGTGTGCAGATGGATTGCAGCTTGATAACAAGGATGGGAAAGAGGGCATGGACCATTGCCATTACGGGATTGGTAGTACCCATTTTTGTCGCCATTTCAATCGTAGCCGTATTCCAAAATCCACTGCGTGACGTCATCAAAGATAGCCACGACAATTTAGCAGTTGCATTGGTCTCCCACACTGTTATTTCATTTGCTGTCATCGCTTCCCTTGTCAATGAACTTCAAATCCAAAACTCCGAACTTGGTAAACTGGCGTTGTCTGCCGCATTGGTGAGTGACGTATTGTGCACAATCGTTACCACCTGCGGCACTGCTTTTATGTTTAGTGAGGATTCTGGTTCGAAAGATGCTACGAAAAGCCTCTTTTGTTTGTTTGCAATGGGTATCCTTGTTCCATTAGTGTGTCGCCCAGTAATGTTTTGGATCGTGAGACATACTCCAGAAGGAAGGCCTGTGAAAGATGGTTACGTTTACGTTATCATCGTACTGCTCTTCATGATAGGTTGGCTTTCGGTTAAAATAAACCAAGAATTCGTGCTTGGAGCTTTCATTCTGGGATTGGCCGTGCCGGAGGGACCTCCACTGGGATCTGCATTGGTCAAGAAGCTTAATTTCTTTGGTACCACCTTCCTTTTGCCAATCTTCATCACTATCAGCATGTTGAAAGCAGATTTTTCCTTCGCTTATTCATCCGCATCAGTTTTGAGTATATGTCTCGTCATCATCCTCACCCACCTGGTTAAAATTATATCATGCACTGTGCCCGCCCTCTACAGCAACATGCCCTTCCGTGATGCTCTCGCTCTCTCCCTCATTTTGAACTCCAAAGGTGTTGTGGAAATCGGACTCTACTGCTTCTTATACGATTACAAGATAATCGACGGGCTAACATACGGAATAATGATTCTGAGCATAATAGTGGTGGCATGCACTGTGCAATGGTCTGTGAGGTTTCTGTACGACCCTTCAAGAAAATTCGCGGGGTACCAGAAAAGGAACATCGTGAGTTTAAGAGCCTGGTCAGAGCTGAGGATGCTGGTGTGCATTCACAAGCCAAGCCACATATCGTCGATGATAGATGTGGTTGACCTGTGTTGTCCAACGGCAGAAAGTCCGATCGTGGTGGATGCATTGCATCTGATAGAGCTGGTGGGACGTGCCTTGCCAATTTTCATTCCGCATCGAATTCAAAGGCAAGAATCAGGGAATCAGCACAGGTCATACTCGGATGATGTAATTCTAGCTTTCGACGTGTACGAGCACGAAAACCCAAATGCGGTGACGGCGTACCCAAGCACCGCAATCTCTCCACCGAACCTGATGTACGAAGACGTGTGCAACCTAGCCTTCGACAAGGTGGCGTCGATGATAATTCTTCCGTTCCATCAGAGATGGTCGGTGGACGGGGAAGTGGAAGAGGAGGAGAAGAGCATAAGGGCACTGAATTGTAGGGTGCTAGAAATAGCTCCGTGCTCGGTTGGGATACTGGTGACGAGAGGATCGCAAAGAACGAGGGAGGAGTCGGGAAGTAGATTGGGGTTGATATATCTGGGGGGAGAGGACGACGAGGAGGCGCTGTGCATAGCGAAGAGAGCGATGATGAAGAGGGGGAAGAGGCTGGTGGTGTACCACCTGGTGTGCAGGGCAGATGAGAGGGATGAAACGGAGGAGCTGGAGGAGATGAAGAGGAGGCATGAGGAGAACGTGAGGTACGAAGAGATAGTGGCAAGGGAGGGGTCTGAGACGGCAGCGTTTCTGAGTGATATTGCGAAAGAGCACGACTACTTCATCGTTGGGAGGAGGCATGGGATTGAATCCCCTCAGACACAGGGACTCACTAACTGGAGCGAATACCCAGAGTTAGGTGTCATCGGTGATTTTCTGGCTTCCCCTGACTTGGAGACCCGTGCTTCTATTTTGGTTGTGCAGCAACAGTTCGCACCCAAGCCTCGTAAAGGCTGGTTATTTTAG 2370 0.4823 MNLNANETMFLSIAEVGEGSQRFLVCLDAPPHIVSDGLWRSSPQNTRSPMKSFLPLFELQVLLIFAISQICRLLLMPLKLPLFISQMAGLILQVLFAVDPLGTYMRVLFPYGTHDTITTVSSIGFVLFVFINGVQMDCSLITRMGKRAWTIAITGLVVPIFVAISIVAVFQNPLRDVIKDSHDNLAVALVSHTVISFAVIASLVNELQIQNSELGKLALSAALVSDVLCTIVTTCGTAFMFSEDSGSKDATKSLFCLFAMGILVPLVCRPVMFWIVRHTPEGRPVKDGYVYVIIVLLFMIGWLSVKINQEFVLGAFILGLAVPEGPPLGSALVKKLNFFGTTFLLPIFITISMLKADFSFAYSSASVLSICLVIILTHLVKIISCTVPALYSNMPFRDALALSLILNSKGVVEIGLYCFLYDYKIIDGLTYGIMILSIIVVACTVQWSVRFLYDPSRKFAGYQKRNIVSLRAWSELRMLVCIHKPSHISSMIDVVDLCCPTAESPIVVDALHLIELVGRALPIFIPHRIQRQESGNQHRSYSDDVILAFDVYEHENPNAVTAYPSTAISPPNLMYEDVCNLAFDKVASMIILPFHQRWSVDGEVEEEEKSIRALNCRVLEIAPCSVGILVTRGSQRTREESGSRLGLIYLGGEDDEEALCIAKRAMMKRGKRLVVYHLVCRADERDETEELEEMKRRHEENVRYEEIVAREGSETAAFLSDIAKEHDYFIVGRRHGIESPQTQGLTNWSEYPELGVIGDFLASPDLETRASILVVQQQFAPKPRKGWLF* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00016 789 Coils Coil 681 701 - -
Lapu6g00016 789 PANTHER CATION/H + ANTIPORTER 33 778 - -
Lapu6g00016 789 Pfam Sodium/hydrogen exchanger family 62 443 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Lapu6g00016 789 Gene3D - 57 459 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00016 Lapu-Chr6 203567 206113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00016 24 778 Antiporter Super Family AT2G28180 34.728 5.70e-145 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00016 K26731 - gmx:100785062 1168.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00016 6 203567 206113 Lapu6g00016 6 203567 206113 ECH
Lapu6g02328 6 22809966 22813812 Lapu6g00016 6 203567 206113 PCT