Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01652 ATGGAATCTCAATTAGTTGACAGAAATGATGCTATGGAAGTTTCTGGGGATGTAGATTTGAGTACATATGAAGTTCAGGTACAGCAAGAAACGTATGAAGTGGATCCAAATGAGGGGTGTAGAGTACTAGAGAGTTCTTCTGGGGGAGAGTTGGGCATCTGTGATGATGATCATGCTTTTCAGGAACCATATGAAGGCATGGAATTTGAATCTGAAGATGCTGCTAAGATATTCTATGATGAATATGCCCGACGTTTAGGATTTGTCATGCGTGTGATGTCATGCAGACGCTCAGAAAGGGATGGTAGGATTCTTGCCCGCAGGCTTGGGTGCAATAAAGAGGGCTATTGTGTTAGTATCCGAGGGAAATTTTCATCAGTTCGTAAACCTAGAGCCAGCACAAGGGAAGGCTGTAAGGCAATGATCCATATTAAATATGAGAAATCTGGAAAATGGGTGATAACGAAGTTTGTGAAGGATCATAATCATCCATTAGTAGTCTCTCCACGTGAAGCACGACAAACAATGGATGAGAAGGATAAAAAAATTCAGGAACTAACAGCAGAGCTTCGGCATAAAAAACGGTTGTGCGCGACCTATCAAGAACAGCTGACTTCCTTTATGAAGATTGTTGAAGAGCACAGTGAGAAGCTATCTACGAAAATTCATCTTGTAGTTAATAATCTCAAAGAATTTGAATCTATAGACGAGCTTTTGCACCAAACATAG 729 0.4074 MESQLVDRNDAMEVSGDVDLSTYEVQVQQETYEVDPNEGCRVLESSSGGELGICDDDHAFQEPYEGMEFESEDAAKIFYDEYARRLGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFSSVRKPRASTREGCKAMIHIKYEKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQELTAELRHKKRLCATYQEQLTSFMKIVEEHSEKLSTKIHLVVNNLKEFESIDELLHQT* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01652 242 Coils Coil 176 203 - -
Lapu5g01652 242 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 18 234 - -
Lapu5g01652 242 Pfam FAR1 DNA-binding domain 78 166 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01652 Lapu-Chr5 29569621 29575323 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lapu5g01652 FAR1 7.2e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01652 - - pvu:PHAVU_005G002900g 478.404