Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01648 ATGGATACCTTTGGTAGTACATGTGAGATAGTGGAGTCAAGGGAAGAAATAATTTCTGAGTTCAAAATGGTTGACAAACCTGAGAGTAGTTGTGCTCACAAATCAGGGAAAAAGTATTCGATTGAGGATGATATTAATCAGCTTTTCCAGGCTATTGATATTAAAAGTTCATCAAGAGGTCACAGTTCATTACGTTTACAAAAGAATGCTCTTAAAAGGCCAATAAAAGTCACTTCATCTCAGGCATCAGGAATTGGCATCTCAGAGCCTGTAAGTTTAAAGCAGGCACTTAGAGGGTTGTGCATCTCTCAGGCCTCAGAAATGGCTGCTTTGAAAAGACTATCTAAGCCATGCAGTTCATCTAGAGTATCAGAGGCTGGCACCATCAAAAGGTTGTACACAGCAGTGGTAGACGAGGGGAAAGGGAACTTGGTTGAAATTTCTCTAGTTCCAGAGATATCTACTGCACCTTCTAATAAATTGCCTGGTGTAACTATATCAAGTTCAATTGATCATTGTTCGAGTCCTTCGGTTGATGCTACAGAAGCAAAAGAAATGATGATTGAGTTTTCATCCCAAGATCAGATTGTTCCTCTGCCATTAGAGGTTGAGGGTGACAAACCAATCATGGACATTGGAAAACCAATACTTGCAAATTTGTCGACAGTTTCCTCTGCTAGTGGAGTGGTGCCAGAGGTTAGAAGGGATCCCGCTTCCTTAAGCAAAGCTTCTCTTAGTTCTTCAATGCCAGTTAAGGGGCAGGAAGCAAATTTACTTCCTGCATCTTGTCCACCTTGCTCTAGCACTGGTAATGGAGGGGATAAATCAACGAGCAGTAATACATGTTTGTCAAAGCCAATATTCAATAACTTGAACTTCCTGAAGAAAAAGTTAAAGCAGGATTTAAGTTCTGCCTCGAGCTGCTCCACTCCATCTACAAGTAATTTGGACAAGGAGGTTGGAAATTCTGATTTGAAGCACGGAATGAAAGAAAATGAGAAATTGTCTACTAGCAGTTCAAGCCATAGCATTAAAGTGAACTCATGTAATGTTGGTACGGATTCAAGCAAACCTGGTTTCAGCCTGAGCTGCAATAAGAGAACTAAATTTTTGGTGACAAAAGTTGACGAGAAATCAAGATCAAAGGAAAAGGGTGAGTTCTCTCAAAGTTCAAAAAGTAGCATTGGTGAGTATAGTAGTAGCACAAGCATCAGTGAGGAAAGCAGTCTAAGTGGTTCCAGCCGTGGTGGCCACAGACCTCATATGTCGAAACACATGAGATGGGAAGCTATCCGTGCTGTTCAGCAGCAACATGGTAATTTAAATTTGAAGCACTTTAAGCTGATAAAGAGGCTTGGTAGTGGGGACATTGGAACTGTTTACCTTGCGGAACTCATTCGTACAAGCTGCCTTTTTGCACTCAAAGTGATGGACAATGAATTTTTGTCAAGTCGGAAGAAAATGTTCAGGGCCCAAACTGAAAGAGAGATCCTTCAGATGCTAGATCATCCATTTCTTCCTACGCTGTATTCCCATATTGCAACAGATAAACTCTCTTGCTTGGTTATGGAGTATTGTCCAGGAGGAGATCTGCATGTGCTACGACAGAGGCAGTCATACAAGAGTTTTTCTGAACAAGCAACTAGGTTTTATGTTGCTGAGGTTCTTCTGGCCCTGGAGTATTTGCACATGCTGGGAGTTGTATATCGAGACCTAAAGCCGGAAAATATCCTGGTACGAGAAGATGGACATATTATGCTGACAGATTTTGATTTGTCACTCAGGTGTTCTGTCAATCCAATTTTAGTCAAGTCATCTTCACCTGACACAGATGCCACGAAGAAGACGTCCAGTCCCTGTTCTGAAGCTAGCTGCATACACCCTTTCTGTCTCCAACCAGATTGGCAAGTTTCCTGCTTTACTCCCATTCTACTCTCTACTGGAGCAAAATCCCGAAAGATGAAGTCTGACATAGCTTCTCAGGTTGGTCCACTGCCTCAGCTTGTAGTGGAGCCTACCAGTGCACGGTCAAACTCCTTTGTTGGAACCTATGAATATCTTGCACCAGAGATCATCAAGGGTGAAGGTCATGGGAGTGCAGTAGATTGGTGGACTTTTGGTATACTTTTGTTTGAGCTTTTATATGGTAAGACTCCCTTCAAGGGCCAATCAAATGAGGACACATTAGCCAATGTTGTGTCACAATGCCTTAAGTTCCCGGGTTCTCCAATAGTCAGTTTTCATGCTAGAGATTTGATCAGAGGGTTGTTGATAAAGGATCCTGAAAATCGATTAGGTTCTCTAAAAGGTGCTGCTGAAATAAAGCAGCACCCCTTCTTTGAAGGCCTCAACTGGGCTCTGATACGGTGTGCAGCACCACCAGAGCTCCCTAAGTTTCGGGATTTTGGAAGTAGTGCTCCATCTATGGCTGCAAATAAGGAGAATGCAAATGATTTAGAGGATATAGAAGATTGTGAAGAGTTTGAGCTGTTTTAG 2496 0.4227 MDTFGSTCEIVESREEIISEFKMVDKPESSCAHKSGKKYSIEDDINQLFQAIDIKSSSRGHSSLRLQKNALKRPIKVTSSQASGIGISEPVSLKQALRGLCISQASEMAALKRLSKPCSSSRVSEAGTIKRLYTAVVDEGKGNLVEISLVPEISTAPSNKLPGVTISSSIDHCSSPSVDATEAKEMMIEFSSQDQIVPLPLEVEGDKPIMDIGKPILANLSTVSSASGVVPEVRRDPASLSKASLSSSMPVKGQEANLLPASCPPCSSTGNGGDKSTSSNTCLSKPIFNNLNFLKKKLKQDLSSASSCSTPSTSNLDKEVGNSDLKHGMKENEKLSTSSSSHSIKVNSCNVGTDSSKPGFSLSCNKRTKFLVTKVDEKSRSKEKGEFSQSSKSSIGEYSSSTSISEESSLSGSSRGGHRPHMSKHMRWEAIRAVQQQHGNLNLKHFKLIKRLGSGDIGTVYLAELIRTSCLFALKVMDNEFLSSRKKMFRAQTEREILQMLDHPFLPTLYSHIATDKLSCLVMEYCPGGDLHVLRQRQSYKSFSEQATRFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVNPILVKSSSPDTDATKKTSSPCSEASCIHPFCLQPDWQVSCFTPILLSTGAKSRKMKSDIASQVGPLPQLVVEPTSARSNSFVGTYEYLAPEIIKGEGHGSAVDWWTFGILLFELLYGKTPFKGQSNEDTLANVVSQCLKFPGSPIVSFHARDLIRGLLIKDPENRLGSLKGAAEIKQHPFFEGLNWALIRCAAPPELPKFRDFGSSAPSMAANKENANDLEDIEDCEEFELF* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01648 831 SMART serkin_6 446 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01648 831 FunFam serine/threonine-protein kinase D6PK-like 675 798 - -
Lapu5g01648 831 Pfam Protein kinase domain 677 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01648 831 Pfam Protein kinase domain 447 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01648 831 SUPERFAMILY Protein kinase-like (PK-like) 420 799 IPR011009 -
Lapu5g01648 831 MobiDBLite consensus disorder prediction 304 324 - -
Lapu5g01648 831 MobiDBLite consensus disorder prediction 304 319 - -
Lapu5g01648 831 Gene3D Transferase(Phosphotransferase) domain 1 674 798 - -
Lapu5g01648 831 MobiDBLite consensus disorder prediction 381 424 - -
Lapu5g01648 831 Gene3D Phosphorylase Kinase; domain 1 444 525 - -
Lapu5g01648 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 567 579 IPR008271 GO:0004672|GO:0006468
Lapu5g01648 831 CDD STKc_phototropin_like 444 803 - -
Lapu5g01648 831 FunFam Serine/threonine-protein kinase D6PK-like 444 529 - -
Lapu5g01648 831 MobiDBLite consensus disorder prediction 388 416 - -
Lapu5g01648 831 ProSiteProfiles Protein kinase domain profile. 446 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01648 831 PANTHER FLIPPASE KINASE 1-RELATED 315 799 - -
Lapu5g01648 831 Gene3D Transferase(Phosphotransferase) domain 1 526 595 - -
Lapu5g01648 831 FunFam serine/threonine-protein kinase D6PK-like 530 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01648 Lapu-Chr5 29543315 29548495 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01648 348 831 AGC Kinase Gene Family AT3G52890 64.271 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lapu5g01648 Pkinase 2.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01648 - - gmx:100784955 1394.02