Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01611 ATGACAGGGATTGCTGAACAAGTGGTGCAAGATTGCTTTGGCAATGTCAAGGACTCCATTGGTGAACTCAAAGATTCCCTTGATTCAATGGACCATTTGGATGGTGCTGACAGAAAGTTTCAGATCAGCAACATAAAGACATGGGTGAGTGCTTCCATCACCAATGACCAAACTTGTTCAGATGGGTTTGATGAGATGAATGTGGATTCCACTTTGACAGACAAAATCAGAAAAGCTGTTTTGGATGTGGCAAGGAAGACTAGCAATGCTTTGTATTTCATCAACAATAATGTGTACTAA 300 0.4067 MTGIAEQVVQDCFGNVKDSIGELKDSLDSMDHLDGADRKFQISNIKTWVSASITNDQTCSDGFDEMNVDSTLTDKIRKAVLDVARKTSNALYFINNNVY* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01611 99 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 97 IPR035513 -
Lapu5g01611 99 CDD PMEI-like_3 5 96 - -
Lapu5g01611 99 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 91 - -
Lapu5g01611 99 Pfam Plant invertase/pectin methylesterase inhibitor 7 91 IPR006501 GO:0004857
Lapu5g01611 99 NCBIfam pectinesterase inhibitor domain 6 96 IPR006501 GO:0004857
Lapu5g01611 99 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 5 96 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01611 Lapu-Chr5 29226234 29226896 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01611 1 96 Carbohydrate Esterase AT3G14310 27.551 2.56e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01611 - - gmx:100527443 189.504