Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01609 ATGCTGTATGGTGATGGTATAAGGGTCACCATCATTTCTGGTAGCCGAAGTGTTGGAGGAGGTTCTACCACTTTTGATTCTGCAACCGTTGCAGTTAGAGGAGATGGATTCATTGGACGAGGCATCACATTCCGCAACACTGCAGGTCCAGAAAAGCACCAAGCAGTGGCAGTGCGTTGTGGTGGTGATCTCTCTGTGTTCTATCAGTGTTCCTTTGAAGGCTACCAAGACACTCTCTATGTGCACTCACAAAGACAGTTCTACAGAGATTGCTACATTTATGGCACAGTGGATTTCATCTTTGGCAATGCTGCAGTGGTCTTTCAATCCTGCAACATCTATGCAAGAAGGCCTATGCAGAAACAGAAAAATGCCATAACAGCCCAAGGTAGAACAGATCCAAATCAAAACACTGGGATTTGCATTCAGAATTCACGTGTTATGGCTGCTGAAGACCTAGCCCCTGTGCTGAGTTCCTTCAAAACCTTCTTGGGAAGGCCATGGAGGGAGTATGCAAGGACAGTGTTCTTGCAAACTTACCTTGATGCATTGATTGACCCTGCAGGGTGGTTGGAGTGGAAAGATGATTTTGCCCTCGACACTTTGTACTATGGAGAGTTCAAGAACCTTGGTCCTAGGGCTTCCACAATAGGTAGAGTGAAATGGCGTGGCTTTCGTGCCATAACAAGTTCAACTGAAGCATCCAAATTCACAGTTGAGAATTTTATTGGTGGGAGATCATGGTTACCAGGCACAGGCATTCCATTTTTCTCAGGATTCCACGATTAA 789 0.4563 MLYGDGIRVTIISGSRSVGGGSTTFDSATVAVRGDGFIGRGITFRNTAGPEKHQAVAVRCGGDLSVFYQCSFEGYQDTLYVHSQRQFYRDCYIYGTVDFIFGNAAVVFQSCNIYARRPMQKQKNAITAQGRTDPNQNTGICIQNSRVMAAEDLAPVLSSFKTFLGRPWREYARTVFLQTYLDALIDPAGWLEWKDDFALDTLYYGEFKNLGPRASTIGRVKWRGFRAITSSTEASKFTVENFIGGRSWLPGTGIPFFSGFHD* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01609 262 PANTHER PECTINESTERASE 1 250 - -
Lapu5g01609 262 SUPERFAMILY Pectin lyase-like 1 259 IPR011050 -
Lapu5g01609 262 FunFam Pectinesterase 1 260 - -
Lapu5g01609 262 Pfam Pectinesterase 1 245 IPR000070 GO:0030599|GO:0042545
Lapu5g01609 262 ProSitePatterns Pectinesterase signature 2. 93 102 IPR033131 -
Lapu5g01609 262 Gene3D - 1 260 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01609 Lapu-Chr5 29216269 29218155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01609 1 260 Carbohydrate Esterase AT2G45220 71.154 3.05e-132 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01609 K01051 - gmx:100776412 473.011