Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01605 ATGGAACTGAAACCAAATCTTTCTCCTGTCCTTACTGATGCCACACCCTTAACAAGGTCAAGGCTGGGTGTGCCTTCTGGGTTGTCACCTTACTCTTCTCCAAAAGGGGCAACCTTTCCCCATCATGGTCCCTTGCTGGCAATTCCAAGGAAGAAGACAGGAATTCTTGATGATTTTCGTTCTAGCGGTTGGCTTGATGCCATGAAATCTTCTTCTCCTACTCACAATAAAGTATCCAAAGATCTTAATCATGGTATTGGATCACCTGATGCTGCATATAGTACCTGGCTGCTGAAGTTTCCATCAGCACTTGCATCTTTTGATCAAATTGCTAATTGTGCAAAAGGGAAGAGAATAGCATTATTTCTTGATTATGATGGGACTCTTTCACCCATTGTGGACAATCCTGACTGTGCGATCATGTCAGATAATATGCGTGCTGCTGTTAAAAAAGTGGCGGAATATTTTCCAACTGCAATAATTAGTGGAAGAAGTCGTGACAAGGTATACGAATTTGTTGGAGTAAGTGACCTCTATTATGCTGGTAGTCATGGGATGGACATTATTGGTCCTCCCAGACAATCTATTTCTGATGATCATCCTGATTCTGACAAGCAGGGTGTTGGAGAAGTTAATTTATTCCAACCTGCTGCCGAATTCCTCCCTATGATTGATGAGGTACTTAGGTTGCTCAAGGAGTGTACGAAAGACATTGAAGGAGCGACAGTTGAGAACAATAAATTTTGTGCATCTGTACATTACCGAAATGTAGATGAGGAGAGTTGGCAGATTGTGGGACAACGTGTGTATGATGTTATGAAGCAGTATCCACGTTTGCGTTTAACTCATGGGCGGAAGGTTTTAGAGGTTCGGCCAGTGATTGACTGGGATAAGGGGAAAGCTGTCACATTTTTACTTGAGTCACTTGGACTTAACAATTGTGATGACGTGCTAGCTATATATGTTGGAGATGATAGAACAGATGAAGATGCATTTAAGGTTTTGAGAGAAGATAATAAAGGTTTTGGCATCTTAGTGTCCCCTGCCCCAAAAGAAAGCAACGCAATTTACTCACTTCGTGATCCCTCAGAGGTCATGGAATTTCTGACATCACTTGCTGTATGGAAATCAAGCATTCAAGCTCGTTGA 1149 0.4204 MELKPNLSPVLTDATPLTRSRLGVPSGLSPYSSPKGATFPHHGPLLAIPRKKTGILDDFRSSGWLDAMKSSSPTHNKVSKDLNHGIGSPDAAYSTWLLKFPSALASFDQIANCAKGKRIALFLDYDGTLSPIVDNPDCAIMSDNMRAAVKKVAEYFPTAIISGRSRDKVYEFVGVSDLYYAGSHGMDIIGPPRQSISDDHPDSDKQGVGEVNLFQPAAEFLPMIDEVLRLLKECTKDIEGATVENNKFCASVHYRNVDEESWQIVGQRVYDVMKQYPRLRLTHGRKVLEVRPVIDWDKGKAVTFLLESLGLNNCDDVLAIYVGDDRTDEDAFKVLREDNKGFGILVSPAPKESNAIYSLRDPSEVMEFLTSLAVWKSSIQAR* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01605 382 NCBIfam HAD-IIB family hydrolase 121 336 IPR006379 -
Lapu5g01605 382 NCBIfam trehalose-phosphatase 116 373 IPR003337 GO:0003824|GO:0005992
Lapu5g01605 382 FunFam Trehalose 6-phosphate phosphatase 223 382 - -
Lapu5g01605 382 SUPERFAMILY HAD-like 120 374 IPR036412 -
Lapu5g01605 382 Pfam Trehalose-phosphatase 122 363 IPR003337 GO:0003824|GO:0005992
Lapu5g01605 382 Gene3D - 119 210 IPR023214 -
Lapu5g01605 382 Gene3D - 213 381 IPR023214 -
Lapu5g01605 382 CDD HAD_TPP 120 367 - -
Lapu5g01605 382 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 30 380 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01605 Lapu-Chr5 29175523 29181162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01605 115 373 Trehalose Biosynthesis Gene Families AT1G70290 25.000 2.69e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01605 K01087 - gmx:100783008 696.812