Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01585 ATGGGTTCAATCGAAACCCCAACCGGCAATGGGAAGTCTCCTTCGTTCGACGGCGCGGAGGCGGCGCTGGAGCCCAACACGTCGAAGCGGCGGAGGTCGTCGGTGCTCCCCCTGGAGGTCGGCACGCGCGTCATGTGCCGGTGGAGGGACAGCAAGTACCATCCCGTTAAGGTCATCGAACGCCGCAAGATTCCCCATGCCGATTACGAGTACTACGTCCATTACACCGAGTTCAATAGAAGGCTTGATGAGTGGGTTAAGCTTGAACAGCTTGATCTTGATTCAGTGGAGGCTGTTGTCGATGAGAAAGTGGAGGAGAAGGGTGCGACTGGCTTGAAGATGACACGCCACCAAAAGAGGAAGATTGATGAGACTCATGTAGAGGGACATGAGGAGCTTGATGCTGCCAGTTTGCGAGAACATGAAGAGTTTACAAAAGTGAAAAACATTGCTACTATTGAGCTTGGAAGATATGAGATTGAGACATGGTACTTCTCCCCATTCCCACCCGAATACAATGACTGTTTGAAGCTGTACTTTTGTGAGTTTTGCCTCAATTTCATGAAGCGCAAAGAACAGCTTCAGAGGCATATGAAGAAATGCGATCTGAAGCATCCCCCTGGTGATGAGATATACAGAAGTGGGACATTGTCAATGTTTGAGGTTGATGGAAAAAAGAACAAGGTTTATGGGCAGAATCTTTGTTATTTGGCGAAGTTATTTCTTGATCACAAGACTCTCTATTATGATGTAGACCTGTTTCTGTTCTATGTTTTGTGTGAATGTGATGATCGAGGTTGTCACATGGTTGGCTATTTCTCCAAGGAAAAACATTCTGAGGAATCTTACAATTTGGCATGTATCCTCACCCTTCCGCCTTACCAAAGGAAAGGCTATGGCAAATTTCTAATTGCATTCTCATATGAATTGTCGAAGAAGGAGGGCAAAGTTGGGACACCTGAAAGACCCCTTTCAGACCTTGGACTGCTAAGCTACAGAGGATATTGGACGAGGGTTCTCTTAGACATTCTGAAGAAGCACAAGGGGAACATTTCTATCAAGGAACTGAGTGATATGACAGCAATTAAAGCAGAAGATATATTAACGACCCTGCAGAGTCTAGAATTGATTCAATACAGGAAAGGTCAACATGTGATATGCGCAGATCCGAAAGTGTTGGATCGCCATCTTAAAGCTGCTGGGAGGGGGGGCCTTGAGGTCGATGTTAGCAAATTGATCTGGACTCCTTATAAAGAACAAAGTTGA 1266 0.4589 MGSIETPTGNGKSPSFDGAEAALEPNTSKRRRSSVLPLEVGTRVMCRWRDSKYHPVKVIERRKIPHADYEYYVHYTEFNRRLDEWVKLEQLDLDSVEAVVDEKVEEKGATGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDCLKLYFCEFCLNFMKRKEQLQRHMKKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYKEQS* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01585 421 CDD CBD_MOF_like 41 107 - -
Lapu5g01585 421 Pfam MYST family zinc finger domain 147 201 IPR040706 -
Lapu5g01585 421 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 146 417 IPR016181 -
Lapu5g01585 421 FunFam Histone acetyltransferase 28 145 - -
Lapu5g01585 421 FunFam Histone acetyltransferase 324 403 - -
Lapu5g01585 421 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 145 416 IPR002717 GO:0004402|GO:0006355|GO:0016573
Lapu5g01585 421 MobiDBLite consensus disorder prediction 1 34 - -
Lapu5g01585 421 PANTHER HISTONE ACETYLTRANSFERASE 44 417 - -
Lapu5g01585 421 Pfam MOZ/SAS family 206 383 IPR002717 GO:0004402|GO:0006355|GO:0016573
Lapu5g01585 421 Gene3D - 27 145 - -
Lapu5g01585 421 Gene3D - 324 404 IPR036388 -
Lapu5g01585 421 Pfam RNA binding activity-knot of a chromodomain 38 93 IPR025995 -
Lapu5g01585 421 FunFam Histone acetyltransferase 204 332 - -
Lapu5g01585 421 Gene3D - 204 416 - -
Lapu5g01585 421 SUPERFAMILY Chromo domain-like 32 146 IPR016197 -
Lapu5g01585 421 SMART chromo_7 52 108 IPR000953 -
Lapu5g01585 421 CDD NAT_SF 257 315 - -
Lapu5g01585 421 Gene3D - 146 202 - -
Lapu5g01585 421 FunFam Histone acetyltransferase 144 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01585 Lapu-Chr5 29021349 29028206 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01585 4 421 C2H2 Transcription Factor Family AT5G64610 86.175 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01585 K11308 - gmx:100819116 829.706