Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01583 ATGAATCATGTTGTGATCATGACACCATCAACAACAAATATTCCTGAACTTCCAACATCAAATTCAAGTTCCAGCAACGTCTTCCACCCATTTGAGAACACTCTTGTTAACTCATCATCACGGAGAAGTTCCATGTCCATTCACTCTTCTGGGAGCAGGAGCAACAACTCTATGCATGAGGTGAGTTTGAGCGGTTCAGTGTCCAAATCCATACCTGTTAGGTATGGCTCAAAGGGTGCAGATTCTGAAGGACTAAGCGTGTCTCAGAGGGAACTGAGAGATGAGGATGCAAGGTTAGTGTACATAAACGACCCTTTGAAAACGAATGAGGCCTTTGTGTTTGCTGGAAACTCTATCCGCTCAAGCAAATATTCCCTCCTCAGTTTCATTCCGAGGAACCTTTTTGAACAGTTTCACAGGATTGCTTACGTCTACTTTCTCATAATTGCCATTCTCAATCAGCTTCCTCAGCTTGCAGTTTTTGGAAGGGCTGTTTCCATCTTGCCACTGTCCTTTGTGTTGTTTGTCACAGCTGTGAAGGATGCGTATGAGGATTGGAGAAGGCACAAGAGTGATAAAGTTGAGAACAATAGGTTGGCATCCGTTTTGGTTGATGGAAACTTTGTGGAGAAGAGGTGGAGGGATGTTAGAGTTGGTGAGGTGATAAAGATCAAGGCAAATGAACCCATCCCCTGTGATATTGTGTTGCTCTCAACTAGTGATCCAACCGGGGTTGCGTATGTGCAGACTATTAATCTAGATGGGGAGTCCAATTTGAAGACAAGGTATGCAAAGCAAGAGACGCATGGTAAGGAGGGGTTAGGTGGGGTGATTAAGTGTGAGAAACCCAATAGGAACATATATGGATTTCTGGCTAACATGGAAGTTGATGGCAAGAAGTTGTCACTTGGATCCTCCAACATTGTGCTTCGTGGATGTGAACTCAAGAATACTAGTTGGGCTATTGGTGTTGCTGCGTACTGTGGGAGTGAGACCAAGGCTATGCTGAATAGCTCAGGAGCTCCTTCTAAGAGAAGCAGATTGGAGACACGCATGAATTTCGAGATCATTTGGCTCTCTTTCTTCCTCGTGGCATTGTGCACAATCACCTCAGTTTGTGCTGCTGTGTGGTTGAAGCGCCACAAGGATGAGTTGAATCTGCTGCCATATTATAGGAAACTAGACTTTTCAGAAGAGGGGGAAGTTGACAGCTACGAGTACTATGGATGGGGGTTGGAGATTCTCTTCACATTCCTCATGTCAGTTATAGTGTTCCAGGTCATGATTCCCATTTCCTTGTACATTTCCATGGAGCTTGTGAGGGTTGGTCAGGCCTTCTTCATGATCCGAGACAACAGAATGTATGACGAGGAAACAAAGTCAAGGTTTCAGTGCAGGGCTTTGAACATTAACGAAGATTTGGGGCAGATTAAGTACGTTTTCTCAGATAAAACTGGCACACTGACTCAGAACAAGATGGAGTTTCAATGTGCAAGCATCTGGGGGGTTGATTACAGTTCTACAGAGAACAGCATGGAGGGTGATCAAGTTGAACATTCTGTGGAAGTGAATGGAAAGGTCTTCAGACCAAAGATGAAGGTTAGAGTTAATCCAGAGCTTTTGCAGCTAGCAAGAAGTGGATTTCTCAATTTGGAGGGAAAACGGATTCACGATTTCTTTATAGCACTGGCAACCTGCAACACTATTGTGCCTCTTGTTGTTGACTCACCTGACCCTGCTGTCAAGCTGATAGATTACCAAGGAGAATCCCCAGATGAACAAGCATTAGCTTATGCTGCTGCAGCCTATGGTTTTATGTTAATAGAACGAACCTCTGGCCATATAGTCGTCGATGTTCACGGACAAAGACAAAAGTTCAATGTCTTGGGTATGCATGAGTTTGATAGTGACAGGAAGAGGATGTCCGTTATATTGGGATACCCTGACAATTCTGTGAAAGTGTTTGTCAAAGGAGCAGACACATCCATGCTTAATGTGATACACAAGTCATTTAACATGGACTTAGTAAGAGCCACGGAAGCACATCTTCACTCTTACTCCTCCATAGGTTTGAGGACACTTGTTATTGGGATGAGAAACTTGAATGCTTCAGAATTTGAGCAATGGCATGCATCCTTCGAGGCAGCAAGCACTGCTGTGTTTGGAAGGGCTGCGATGCTCCGCAAGGTTTCTAGCATTGTAGAGAACAGTCTCAGCATATTGGGAGCATCTGCCATTGAAGATAAACTGCAAGAAGGGGTACCTGAATCCATTGAGTCTCTAAGGATTGCAGGGATTAAAGTGTGGGTTCTGACTGGGGACAAACAAGAAACTGCCATATCCATTGGCTATTCTTCAAAGCTCCTAACAAGCAAAATGAATCAGATTATAATCAACAGCAACAACAGAGCAGCATGCAGAAAAAGTTTGCAAGATGCCCTTGTCATGTCTAAAAAGCTCATGTCCACATCCAACAATGCTGGAGGAAGTTCAGAGGCAACTCCAATAGCCTTGATTATTGATGGTACCAGTCTTGTGCATATTCTTGACAGTGAACTTGAAGAACAGCTATTTCAACTTGCAAGTAGATGTTCTGTTGTTCTATGTTGCCGAGTTGCTCCACTGCAAAAGGCTGGCATTGTTGCCCTTGTGAAGAATAGGACATCTGACATGACTCTAGCCATTGGAGACGGTGCTAATGATGTCTCGATGATCCAAATGGCTGATGTTGGAGTTGGCATCAGTGGACAAGAGGGTCGGCAAGCTGTAATGGCATCTGATTTTGCAATGGGGCAGTTTAAGTTTTTGGTTCCTCTCTTATTGATACATGGGCATTGGAATTACCAACGGCTGGGTTACATGATACTATACAATTTTTACAGAAATGCTGTCCTTGTTCTAGTCTTATTTTGGTATGTGCTCTACACTGCCTTCACTTTGACAACTGCTATAAATGAATGGAGCACGACGTTATACTCAATAATCTACAGTTCATTGCCAACTATAATTGTTGCTATTCTAGACAAGGATCTTGGTAAAAGGACTCTCCTAAAGTACCCTCAACTTTATGGGGCAGGACAGAGACATGAGGCCTACAACAAGAAATTGTTTGCATTGACAATGTTAGATACTTTGTGGCAAAGCATGGTCATCTTCTGGGCACCCCTCTTTGCATATTGGAATAGCACAGTTGATGTGGCAAGCATTGGAGACCTTTGGACTTTTGGGGTTGTTATTTTGGTTAATTTGCACTTGGCCATGGACGTTGTAAGGTGGTATTGGGTGACCCATGTTGCCATTTGGGGTTCTATTGTTGCAACTTTCATTAGTGTCATGATCATTGATGCTTTCCCCAACCTTCCTGGTTACTGGGCCTTCTATAATGTTGCAGGAACTGGATTGTTCTGGTTGCTGTTGCTTGGAATCATAATAGCAGCATTGCTTCCACGTTTGGTTGTAAAATTTGTTTATGAATATTATTTTCCCAATGATATTCAGATTTGTAGAGAAGCTGAGAAGATTGAGTATGAAAGAGTTGTTGAAAGTGGACAGATAGAGATGCTTCCTATCTCAAACATTCCACCAAGATAA 3591 0.4311 MNHVVIMTPSTTNIPELPTSNSSSSNVFHPFENTLVNSSSRRSSMSIHSSGSRSNNSMHEVSLSGSVSKSIPVRYGSKGADSEGLSVSQRELRDEDARLVYINDPLKTNEAFVFAGNSIRSSKYSLLSFIPRNLFEQFHRIAYVYFLIIAILNQLPQLAVFGRAVSILPLSFVLFVTAVKDAYEDWRRHKSDKVENNRLASVLVDGNFVEKRWRDVRVGEVIKIKANEPIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETHGKEGLGGVIKCEKPNRNIYGFLANMEVDGKKLSLGSSNIVLRGCELKNTSWAIGVAAYCGSETKAMLNSSGAPSKRSRLETRMNFEIIWLSFFLVALCTITSVCAAVWLKRHKDELNLLPYYRKLDFSEEGEVDSYEYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRVGQAFFMIRDNRMYDEETKSRFQCRALNINEDLGQIKYVFSDKTGTLTQNKMEFQCASIWGVDYSSTENSMEGDQVEHSVEVNGKVFRPKMKVRVNPELLQLARSGFLNLEGKRIHDFFIALATCNTIVPLVVDSPDPAVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHIVVDVHGQRQKFNVLGMHEFDSDRKRMSVILGYPDNSVKVFVKGADTSMLNVIHKSFNMDLVRATEAHLHSYSSIGLRTLVIGMRNLNASEFEQWHASFEAASTAVFGRAAMLRKVSSIVENSLSILGASAIEDKLQEGVPESIESLRIAGIKVWVLTGDKQETAISIGYSSKLLTSKMNQIIINSNNRAACRKSLQDALVMSKKLMSTSNNAGGSSEATPIALIIDGTSLVHILDSELEEQLFQLASRCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFKFLVPLLLIHGHWNYQRLGYMILYNFYRNAVLVLVLFWYVLYTAFTLTTAINEWSTTLYSIIYSSLPTIIVAILDKDLGKRTLLKYPQLYGAGQRHEAYNKKLFALTMLDTLWQSMVIFWAPLFAYWNSTVDVASIGDLWTFGVVILVNLHLAMDVVRWYWVTHVAIWGSIVATFISVMIIDAFPNLPGYWAFYNVAGTGLFWLLLLGIIIAALLPRLVVKFVYEYYFPNDIQICREAEKIEYERVVESGQIEMLPISNIPPR* 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01583 1196 Pfam E1-E2 ATPase 199 438 - -
Lapu5g01583 1196 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 487 754 IPR023299 GO:0000166
Lapu5g01583 1196 FunFam Phospholipid-transporting ATPase 585 718 - -
Lapu5g01583 1196 NCBIfam phospholipid-translocating P-type ATPase 114 1170 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lapu5g01583 1196 SUPERFAMILY HAD-like 476 950 IPR036412 -
Lapu5g01583 1196 CDD P-type_ATPase_APLT_Dnf-like 116 1055 - -
Lapu5g01583 1196 PRINTS Sodium/potassium-transporting ATPase signature 474 495 - -
Lapu5g01583 1196 PRINTS Sodium/potassium-transporting ATPase signature 972 992 - -
Lapu5g01583 1196 FunFam Phospholipid-transporting ATPase 172 337 - -
Lapu5g01583 1196 ProSitePatterns E1-E2 ATPases phosphorylation site. 483 489 IPR018303 -
Lapu5g01583 1196 Gene3D - 169 337 - -
Lapu5g01583 1196 PRINTS P-type cation-transporting ATPase superfamily signature 895 914 - -
Lapu5g01583 1196 PRINTS P-type cation-transporting ATPase superfamily signature 481 495 - -
Lapu5g01583 1196 Gene3D - 737 935 IPR023214 -
Lapu5g01583 1196 Pfam Phospholipid-translocating ATPase N-terminal 100 166 IPR032631 -
Lapu5g01583 1196 FunFam Phospholipid-transporting ATPase 737 935 - -
Lapu5g01583 1196 Pfam Cation transport ATPase (P-type) 589 664 - -
Lapu5g01583 1196 Gene3D - 460 477 - -
Lapu5g01583 1196 Gene3D - 585 717 IPR023299 GO:0000166
Lapu5g01583 1196 SUPERFAMILY Calcium ATPase, transduction domain A 197 334 IPR008250 -
Lapu5g01583 1196 SFLD Haloacid Dehalogenase 465 946 - -
Lapu5g01583 1196 Gene3D - 491 515 IPR023299 GO:0000166
Lapu5g01583 1196 SUPERFAMILY Calcium ATPase, transmembrane domain M 114 1162 IPR023298 -
Lapu5g01583 1196 Pfam Phospholipid-translocating P-type ATPase C-terminal 923 1163 IPR032630 -
Lapu5g01583 1196 SFLD p-type atpase 465 946 IPR044492 -
Lapu5g01583 1196 Gene3D - 478 490 IPR023214 -
Lapu5g01583 1196 MobiDBLite consensus disorder prediction 1 60 - -
Lapu5g01583 1196 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 89 1175 - -
Lapu5g01583 1196 NCBIfam HAD-IC family P-type ATPase 866 981 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu5g01583 1196 NCBIfam HAD-IC family P-type ATPase 413 509 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01583 Lapu-Chr5 29001918 29007564 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01583 45 1196 Primary Pumps ATPases AT5G04930 66.782 0.0 1647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01583 K14802 - gmx:100813982 2065.81