Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01582 ATGAAGAAGAAAAGCTTGTTTTGGCAAAGCTTTGACCACCCTTGTGATACTCTCTTGCCAGGAATGAAGCTTGGATGGGACCTTAAAAAGGGTATTCACAGGAAGCTAAGTGCATGGAAGAGTTGGGATGATCCATCTTCGGGGAACTTAACTTGGGGTATGCTCCTTAGTAGTAACCCTGAATTGGTTCTGAGAAAAGGTTCAGTTGAGTATCATAGGAGTGGACCTTGGAATGGACCAGGGTTTAGTGGTCAGCCAGTACTGAGAATCACTCCAAACGTTGACACCAAATTTGTGAATGATTCAAATGAGGTTTATTACTCATACACGCTGAGGAACAAGTCTGTGATCTCAATAACATATTTGAACCAAACTCTTCTTCATCGCCAACGCATCACATGGATTCCTGAAAACAAAACTTGGAGGGTTTATGAGTCTGTGCCTAGAGATGACTGTGATCCTTACAACCCATGTGGCCCTAATGGAAACTGCATGGCTAATGAGACACCGATTTGCCAGTGTTTAGAAGGGTTTGAACCAAAATCTCCTCAGAATTGGAACTCTTTTGAGTGGACACAAGGATGTGTACGTAGTGAAGATTGGAGTTGTGGGGTGAAAAATGAAGATGGTTTTCGTAGATTTGCTTCAATGAAAGTTCCTGACACCAGAAATTGTTGGACTTATGAAAACATGGAACTTGAAGCTTGTAGGATGGAATGCTTGAAAAATTGTTCTTGCATGGCTTATTCAAACTTGGACATAAGGGAAGGTGGCAGTGGTTGTTCCATTTGGTTTGGTGATCTTGTTGATTTGAAATTGGTTCAAGCAAGCCAACAAGACATATATATTCGAATGGCTATTCCAGATTCAGATGAAGATACAAGAAAAAAGGCTTTGGTGATTACGATCCCACTTGTGTCTGTCACTATTTTGGTACTTCTTGTCTTTTTTTATATTTCCAAGGGAAAAAGAAAGCACAGAGGGAAAAAATATGATACAGAGAATATGGTATCAATTGAAAAGAAATATGAAGAAGAGAACCATGATTTTGAGCTTCCTTTCTTTGATCTCCATGTAATATTGAATGCCACCAATGGTTTCTCAGAAGACAACAAGCATGGTGAAGGTGGTTTTGGACCAGTATATAAGGGCACACTCTTAGATGGAAGGGATATTGCTGTCAAACGACTTTCAAGGAATTCAACACAAGGGATGAAAGAATTTAAGAATGAAGTTATATTATGTGCAAAACTTCAACATCGAAATCTTGTTAAGGTCCTTGGTTGTTGCATTCAAGAAAACGAGAAAATGCTATTATATGAATATATGCCTAACAAAAGCCTAGACACATTTCTTTTTAATTCAACTCAAAGTAAGCTTTTAGATTGGTCTACGCGCTTCAACATCATATGTGCAATTGCTCGTGGACTTCTTTATCTACACCAAGATTCTATATTAAGGATCATACATAGAAATCTAAAAGCAAGTAATATTTTACTAGACAATGATATGAATCCAAAAATTTCAAATTTTGGCTTAGCAAGACTTTGTGGAGATGATCAAATTGAAGGGAATACAAGGAGAGTAGTTGGAACATATGGTTATATGGCACCGGAATATGCTATTGATGGATTATTCTCCATAAAATCTGATGTATTCAGCTTTGGCATATTATTGTTGGAGATTGTGAGTGGAAAGAAAAATAGAGGACTTACATATACAAGTGATACTTATAATCTCATTGGACATGCATGGAGATTGTGGAAAGAAGATGATCCAACAAAGTTGATTGATATTTGTTTAGAAGACTCATATGTTATGTCAGAAGCCTTGCATTGTATTCAAGTTGGTCTTTTATGTCTACAACATCATCCAAATGATAGACCAAACATGGCATCTGTGGTTGTTATGTTGACCACTGAAACTATTTTAGCTCAACCAAAGGAGCCTGATTTCTTAATAGAAAAAGTGATACTTAGTGAAGTAGAATCTTCTATAGGAAAACCACAGATCTTTTCAATTAATGAAGTGTCTATTTCACTATTGGATGCTAGGTAA 2058 0.3707 MKKKSLFWQSFDHPCDTLLPGMKLGWDLKKGIHRKLSAWKSWDDPSSGNLTWGMLLSSNPELVLRKGSVEYHRSGPWNGPGFSGQPVLRITPNVDTKFVNDSNEVYYSYTLRNKSVISITYLNQTLLHRQRITWIPENKTWRVYESVPRDDCDPYNPCGPNGNCMANETPICQCLEGFEPKSPQNWNSFEWTQGCVRSEDWSCGVKNEDGFRRFASMKVPDTRNCWTYENMELEACRMECLKNCSCMAYSNLDIREGGSGCSIWFGDLVDLKLVQASQQDIYIRMAIPDSDEDTRKKALVITIPLVSVTILVLLVFFYISKGKRKHRGKKYDTENMVSIEKKYEEENHDFELPFFDLHVILNATNGFSEDNKHGEGGFGPVYKGTLLDGRDIAVKRLSRNSTQGMKEFKNEVILCAKLQHRNLVKVLGCCIQENEKMLLYEYMPNKSLDTFLFNSTQSKLLDWSTRFNIICAIARGLLYLHQDSILRIIHRNLKASNILLDNDMNPKISNFGLARLCGDDQIEGNTRRVVGTYGYMAPEYAIDGLFSIKSDVFSFGILLLEIVSGKKNRGLTYTSDTYNLIGHAWRLWKEDDPTKLIDICLEDSYVMSEALHCIQVGLLCLQHHPNDRPNMASVVVMLTTETILAQPKEPDFLIEKVILSEVESSIGKPQIFSINEVSISLLDAR* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01582 685 Gene3D Transferase(Phosphotransferase) domain 1 443 650 - -
Lapu5g01582 685 CDD EGF_CA 150 182 - -
Lapu5g01582 685 Pfam S-locus glycoprotein domain 73 182 IPR000858 GO:0048544
Lapu5g01582 685 SUPERFAMILY alpha-D-mannose-specific plant lectins 5 45 IPR036426 -
Lapu5g01582 685 SUPERFAMILY Protein kinase-like (PK-like) 352 657 IPR011009 -
Lapu5g01582 685 ProSiteProfiles Protein kinase domain profile. 367 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01582 685 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 443 646 - -
Lapu5g01582 685 Pfam D-mannose binding lectin 3 40 IPR001480 -
Lapu5g01582 685 ProSiteProfiles PAN/Apple domain profile. 203 286 IPR003609 -
Lapu5g01582 685 SMART ntp_6 206 285 IPR003609 -
Lapu5g01582 685 Pfam PAN-like domain 203 271 IPR003609 -
Lapu5g01582 685 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 4 629 - -
Lapu5g01582 685 ProSiteProfiles EGF-like domain profile. 148 184 IPR000742 -
Lapu5g01582 685 Gene3D Phosphorylase Kinase; domain 1 340 442 - -
Lapu5g01582 685 CDD STKc_IRAK 374 639 - -
Lapu5g01582 685 Pfam Protein tyrosine and serine/threonine kinase 371 636 IPR001245 GO:0004672|GO:0006468
Lapu5g01582 685 CDD PAN_AP_plant 202 286 - -
Lapu5g01582 685 Gene3D Hepatocyte Growth Factor 202 284 - -
Lapu5g01582 685 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 332 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01582 Lapu-Chr5 28994278 28998632 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01582 309 685 Receptor kinase-like Gene Family AT3G45860 48.837 1.48e-117 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu5g01582 PK_Tyr_Ser-Thr 2.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01582 - - tpra:123915417 932.939