Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01577 ATGTACAATCTCACACTCAATGAAGTTCAGAATCAATTAGGTGACACAGGAAAACCACTAAGTAGCATGAACCTCGCTGAGCTTCTGAAAATTGTGTACACTACTGAAGCAAACAAATCTACCATTGTGAACATTAAGGGTACAACTCAAGCTGGTTTGTCATTAACTAGTGCTCTAAGCACAAAAACTGTTGACGAGGTTTGGAGAGACATACAACAAGGAAGCAAAGATAACAAGGAGAAGAAGTGTCAACCTACATTGGGAGAGATGACATTGGAGGATTTCTTGGTGAAAGCTGGTGTTGTTGCTCAATCATCTTCTACTACATTTGGTGTTGATCCAAATTTAGTAACACCACAGTTTCCTCAACATGGTCCTTGGATACAGTATCCACAAGCACAATATCAACTTCCACAACAAGGTTTGATGGGGATTTATATGACTAACCACAACATAGCACATTCGTTACACATACGAGGCAGTGCTACATCAGATGGATATGCAGCAGAGGGTCAGGTGGCATTGTCTTCACCTGTTATGGGAATAGGGAGACATGGCAGAAAACGAGGCACATCAGAAGACATGGTAGAGAAGAACTTTGAGAGGAGGCAAAAGAGGATGATCAAGAATAGGGAATCTGCTGCACGTTCTAGAGCAAGGAAACAAGCTTACACAATTGAATTGGAGCATAAAGCCTCACGTTTGGAAGAAGAAAATGAAAAGCTGAAGAAACAGAAGGAAGTGGAGAAGATGTTATCAAGTGTGGCACCTCAAGAACCAAGATACCAGATTCGAAGAACTTCATCAGCTTCATTTTGA 819 0.4115 MYNLTLNEVQNQLGDTGKPLSSMNLAELLKIVYTTEANKSTIVNIKGTTQAGLSLTSALSTKTVDEVWRDIQQGSKDNKEKKCQPTLGEMTLEDFLVKAGVVAQSSSTTFGVDPNLVTPQFPQHGPWIQYPQAQYQLPQQGLMGIYMTNHNIAHSLHIRGSATSDGYAAEGQVALSSPVMGIGRHGRKRGTSEDMVEKNFERRQKRMIKNRESAARSRARKQAYTIELEHKASRLEEENEKLKKQKEVEKMLSSVAPQEPRYQIRRTSSASF* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01577 272 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 205 220 IPR004827 GO:0003700|GO:0006355
Lapu5g01577 272 SUPERFAMILY Leucine zipper domain 202 247 IPR046347 GO:0003700|GO:0006355
Lapu5g01577 272 Gene3D - 201 254 - -
Lapu5g01577 272 SMART brlzneu 198 257 IPR004827 GO:0003700|GO:0006355
Lapu5g01577 272 Pfam bZIP transcription factor 202 247 IPR004827 GO:0003700|GO:0006355
Lapu5g01577 272 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 200 245 IPR004827 GO:0003700|GO:0006355
Lapu5g01577 272 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 270 IPR043452 GO:0003700|GO:0045893
Lapu5g01577 272 MobiDBLite consensus disorder prediction 250 272 - -
Lapu5g01577 272 Coils Coil 221 252 - -
Lapu5g01577 272 CDD bZIP_plant_BZIP46 202 247 - -
Lapu5g01577 272 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 200 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01577 Lapu-Chr5 28962303 28963934 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01577 1 272 bZIP Transcription Factor Family AT3G56850 48.973 4.09e-76 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu5g01577 bZIP_1 1.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01577 K14432 - gmx:100811685 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g01577 5 28962303 28963934 Lapu5g01577 5 28962303 28963934 ECH