Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01543 ATGAACAGCCACAACTCCTACAGCTTCTCTGTGTTGGATTTTTTTCACTCCCTCCATTCCTCTGAGCTTCTCAGGGACTTCGCCACACGAGAATTCAATGCTTTTTTATGGCTATCTCTTATTGTTGTCACCACCCTTTTGCTCAGAAGACTGTTCAGTCTCTTTGGGTTATGGCGCAGAGCTAGAACCATTCCTGGGCCTCCTTCTTCCTGTTTTATTGGCCGCTGCAAGCTCTTTTCCCGGCCAAATTTCACCTTCACTGATGTGTTGTCAGAATCCCATAAAAAGTATGGACCTATTGTTAAACTGTGGTTAGGTCCTACTCAGCTTTTGGTGTCGGTAAGGGATCCAGCTTTAATCCAAGAGATGCTTATAAAAGCTGAGGATAAGTTGCCTTTTACGGGAAAACTATTTCATCTAGCCTTTGGGCAATCCAGCCTCTTTGCCCCTTCCTTTGAAAAGGTGCAAAAGAGAAGGGAATTATTGGCAACAGAATTAAATGAAAGATTGCTGAAGAATGGTGATATGATTACTGTGAAGGTTGCAGATTTTATCACAGATAAAATAGAAAACATCAGAAAGAAAGAAGGTATTGATTGCAGATTGGTTTCTCAACATATAGCTTTCACTATAATGGGAGCTACATTCTTTGGAGATGGCTTCTTGGTCTCGCCGAAGGCTGCAATGTATGAGGAACTGTTCATGAAGATTGCTAAAGATGTTTGCTTTTGGGCTTCCTATAATGTTACTCCTTTCTGGAGACGTGGATTTTGGAGGTACCAATGCTTGTGCACAAAATTGAAATGCTTAACTCAAGACATCCTTCAACATTGCAGAAAAGGCTGCAAACTATCTGACCAAGTACGTAATGAAAGTTCCATTAAAGAGATGAAGTCAGCAGATGGTGCACAATGCTGTTCTGATGATGAGTTCCAAGATTACTATTTCTTTCGTGATCTTAAGGATCATCAAGATGGTAAAGAAGAATCTTGTGGGAACGTTATGCGCATGATATTTCACGGATGCCAAACTACATCCGCTCTAATCACGGAAGTATTGACTAGGCTTGTCATGCATATGGAAATACAGGATAAGGTTTATTCGGAGATTAACATAGTAGGAAGAAACCCATCGAAATTTGAACAGGAAGATGTTTATAGGATGCCTTTGTTATTGGCTACAATTTATGAATCTGCACGCCTTCTGCCTACTGGTTCCATGCTGCAGAGGTGTTCTTTGAAGCATGACTTGAGCTTTGCAACTGGTGTAACCATACCTGCTGGAGCTGTATTGGTTGTACCTGTTGAATTGGTACAGAAGGATGACTTCAGTTGGGGGAGTGATGCAAGTCACTTCAATCCTTATCGATTCCTCTCAACTGTTACAAATGGATCAGGTTCTGTCGAAGACATTTCTAGTACGGGATTCAGTTCATTTGTACTAAATGATCCAAAAGAAAATGCAGCATTCCTTCCTTTTGGGTCTGGTGCACGTGCTTGCATTGGACAGAAATTTATCATCCAACTTGTTGCCTCAGTGTTGGCATCATTGCTAAATAAATACGAGATACGGCTTAGCTCAGGCTCAGATGATGACTCAAACACAACCTTGAAGAATAATCTTCTCCAGCGTCATCCCAGTTCACAGATACTATTTGTGAGAAGGGACCAGTGA 1674 0.4134 MNSHNSYSFSVLDFFHSLHSSELLRDFATREFNAFLWLSLIVVTTLLLRRLFSLFGLWRRARTIPGPPSSCFIGRCKLFSRPNFTFTDVLSESHKKYGPIVKLWLGPTQLLVSVRDPALIQEMLIKAEDKLPFTGKLFHLAFGQSSLFAPSFEKVQKRRELLATELNERLLKNGDMITVKVADFITDKIENIRKKEGIDCRLVSQHIAFTIMGATFFGDGFLVSPKAAMYEELFMKIAKDVCFWASYNVTPFWRRGFWRYQCLCTKLKCLTQDILQHCRKGCKLSDQVRNESSIKEMKSADGAQCCSDDEFQDYYFFRDLKDHQDGKEESCGNVMRMIFHGCQTTSALITEVLTRLVMHMEIQDKVYSEINIVGRNPSKFEQEDVYRMPLLLATIYESARLLPTGSMLQRCSLKHDLSFATGVTIPAGAVLVVPVELVQKDDFSWGSDASHFNPYRFLSTVTNGSGSVEDISSTGFSSFVLNDPKENAAFLPFGSGARACIGQKFIIQLVASVLASLLNKYEIRLSSGSDDDSNTTLKNNLLQRHPSSQILFVRRDQ* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01543 557 PRINTS E-class P450 group I signature 490 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01543 557 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01543 557 PRINTS E-class P450 group I signature 500 523 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01543 557 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01543 557 Gene3D Cytochrome P450 58 549 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01543 557 CDD cytochrome_P450 98 548 - -
Lapu5g01543 557 Pfam Cytochrome P450 65 550 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01543 557 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 493 502 IPR017972 GO:0005506|GO:0016705
Lapu5g01543 557 PANTHER CYTOCHROME P450 FAMILY 4 46 528 - -
Lapu5g01543 557 SUPERFAMILY Cytochrome P450 64 555 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01543 557 PRINTS P450 superfamily signature 340 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01543 557 PRINTS P450 superfamily signature 491 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01543 557 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01543 557 PRINTS P450 superfamily signature 500 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01543 Lapu-Chr5 28669633 28676670 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01543 32 546 Cytochrome P450 AT1G13710 22.599 3.00e-23 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01543 - - vum:124847778 973