Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01542 ATGGCCACTCAAAAGCTTAGATGTTGTGGAAACTTCCTTGAGAACTCCAAACACCACTTTGCCATGATTGCTCTGCAATTTGGCTATGCAGGCATGAACATTATCACCAAGGTTTCCCTCAACCGTGGAATGAGCCACTATGTTCTTGTTGTTTATCGCCATGCTTTTGCCACAGCTGTTATAGCTCCATTTGCCTTCATCTTTGAAAGGAAAGCTCAACCAAGGATAACATTCACAATTTTCATGCAAATTTTCATCCTGGCTCTACTTGGGCCTGTGATTGATCAAAACTTCTACTATGCTGGGTTGAAATTAACATCTCCAACCTTCTCCTGTGCAATGAGCAACGTGCTTCCTGCCATGACTTTCGTGATGGCAGTTTTATGCAGGATGGAGAAGATCAACATGAAGAAGGTGAGGTGCCAAGCAAAGGTGGTGGGAACATTGGTGACTGTGGGTGGGGCCATGCTGATGACCTTGTACAAAGGACCTCTTGTGGAGATGGTTTGGACCAAACATGCCCTTCATCAAAGACAAAACAATGATGCAACAACAACAAATGGTGCAACACCTTCAGACAAAGATTGGCTCATAGGCTCCATCTTCCTAATCATTGCCACACTTGCTTGGGCATCCCTCTTTGTTTTGCAAGCCAAAGCTATTGAAACCTACAAAAATCACCAGCTAAGCCTCACATCACTCATCTGCTTCATAGGCACTATTCAAGCTATCGCTGTTACTTTTGTTATGGAACACAATCCATCAGTGTGGACAATTGGCTGGGACATGAACTTACTTGCTGCTGCCTATGCTGGGATTGTTACATCAAGCATATCATACTATGTTCAAGGATTGGTGATTAAGAAGAAAGGGCCCGTTTTTGCAACTGCATTTAGCCCTCTGATGATGATCATTGTAGCCATCATGGGTTCCTTCATCCTTGCAGAACAAATTTTTCTTGGAGGTGTGCTTGGTGCCATCTTGATCGTTATAGGGTTATACTCAGTTCTATGGGGAAAGCACAAAGAAGAAGTGGAGAATAAAGTGGTGGAAGATTTGCCTTTAAAGGGTGCAATGGTTGAAGGAAATTCAGATTCCAACAACATTATTTCTTCACATATTATTAGTGTCACCAATGAACCTCCATTGAAATCTAACAATTAA 1164 0.4244 MATQKLRCCGNFLENSKHHFAMIALQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFIFERKAQPRITFTIFMQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNVLPAMTFVMAVLCRMEKINMKKVRCQAKVVGTLVTVGGAMLMTLYKGPLVEMVWTKHALHQRQNNDATTTNGATPSDKDWLIGSIFLIIATLAWASLFVLQAKAIETYKNHQLSLTSLICFIGTIQAIAVTFVMEHNPSVWTIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILAEQIFLGGVLGAILIVIGLYSVLWGKHKEEVENKVVEDLPLKGAMVEGNSDSNNIISSHIISVTNEPPLKSNN* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01542 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 342 - -
Lapu5g01542 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 161 - -
Lapu5g01542 387 Pfam EamA-like transporter family 198 337 IPR000620 GO:0016020
Lapu5g01542 387 Pfam EamA-like transporter family 21 158 IPR000620 GO:0016020
Lapu5g01542 387 PANTHER WAT1-RELATED PROTEIN 20 348 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01542 Lapu-Chr5 28662499 28666173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01542 1 377 Nodulin-like Gene Family AT5G07050 68.814 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01542 - - gmx:100804359 625.935