Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01536 ATGATGGTGGACCTCCCTGACGAATATATGGTACACTTGAAAGATGATTCCTTCAAGAAGATGAAAAATCTTAAAATTCTTATAGTTCGAAATGGAAACTTTTTTGGAAGCCCCCAACATCTTCCAAACAACTTAAGGTTGCTTGATTGGATGAAGTATCCTTCATCTTTACCATCTAGTTTTCAACCAAAGAAACTAGTTGTACTCAACTTGTCAGGCAGCCGTTTTACAATGCAAGAGCCATTCAAGTATTTAGATTCCTTGACTTCTATGGACTTGAGTTCTTGTGAATTGTTGACAAAACTACCAGAAATTTCAGGAGTTCCTAATTTAAAAGAACTAACTCTTGACTATTGTACAAATTTAGAAGAAGTTCATGAATCTGTTGGATTCCTTGAGAAACTTGTTGAGTTCAGGGCTTATGGATGCACCAAGCTTAAGGGTTTCCCGAGTGCCATCAGGTTGACATCATTGAGAAGTCTTATCCTTAATTGGTGCTCAAGCCTTCAAAATTTCCCTGCTATTTTGGGGAAAATGGATAACCTCATGTCCATTTCTATAGAAGGCACTGGTATAAAACAATTGCCTCCTTCCATTGGAAACCTTGTTGGACTTCAAGAATTAAGCATGACATCTTGCTTAAGCCTCAAGGAACTGCCTCACAACTTTGATATGCTTCAAAGTCTTACAAACCTTGATATGGAGGGCTGTCCACAACTTCGAAACTTTTTGACAAAGTTGACGAAGGTGGGAGAATCTACCCATACCTTTGGTAACATTCAGTCACTGAATCTAGAAAACTGTGGCCTTATAGATGAAGATCTTCCCATTATTTTCAATAGTTTCCCAAAATTAGCATCAATAGTCCTCTCAGGAAATAATTTTGTAGCTCTTCCAAGCTGCATGCAAGAATGTCCTTGTTTGGAATTACTTCACTTGGACAACTGTAAAGAACTCCAACAAATTCCAGCATTTCCTCCTAACATACAGTACATTAATGCAGCAAATTGTACATCATTGACTGCAGAGTCATCCAATTTATTATTGAACAAGCAAACTTTTGAGAGATGGGAATTACAAGTTATGGTGCCTGGAGCAATGGTTCCTGAATGGTTTGACCACATCACCAAAGGAGAATATATAACATTTTGGGTACGTGAAAAGTTTCCAGCAATTATCATGTGCTTTGCTCTTGCGGTTGAGAGTGAAATGAAGAAGATTTTTAACTGTGAAATTCGCTTTTATATAAATGGTGATGAAATTTATGAATTGGAAATCACAAGAGGCTTTTCAGAGATGGTGACAGATCATGTTTGGCTCTATGACTTGAGAACTCATTCATCCATCCACTGGGGTAGTCTTGATTTACGTCTAATGGATGGCTGGAATCAGGTTGAGATTTTATGCGAGAAGATAAGTGGAGCATCAAATGTGAGTGTGAGTTGGTGTGGAGTTCATGTGTGTAAGCAAGAAACTAACATGAAGGATGTACTACTTACAGATCCTGATTCAGATATAGATTCAGAGACTTCTGGATCAAATATACTAGTTGTTGATCATCCAGTGAAAGCTCAACCACAGTCACAAGTCACAAGCTTTATACAGACACCTCAAAATAATAACAGCTCCACCATGGTGCTGCCAACAACAGTTGACTTCTTGGAAAAGCAAACCAGCTTGACTATAAATGATGCAGACATGGAAGCATTTTATGCTGTGCTAGATAATGAGATCTCTGTGGTGCTACTTAACAATGACTCCATAGTGGTTTCTGAATTGGACAACAAAATGCCAAGTGAAGAGACAAGGAAAGCATTGAAGACACTTCAAGACTATGTCACCAAAGAATTTTCTGCTCTATTGGGCCCTGATGAATACAGTAAAATGAAAGATACATTAGAGTACCTCACAAATTTACCAGCAGAAGATGGAATATCAATGGAAATAAGATCATTGATAATACAAGTGTCAAGACAGTTCAGTCATTGGAGTAGGGATTACACATGTGAAAACAAGAAAATAGAGTCTACCACAGCCAAGTTATTAAAAGTTGATGAACTAGAAGAGGGTCTTGAAGCTAATAAGACCAATTTCAAGGAAGTGGTGTCATTGGAAAATGAGTTGTGCAATGAGTTGGCCTATTTGGAAGAAAGAAAGAGGGAGCTAGAAGAGCAAATTAATGCTGTTAAAGCTAACATCTCTGCTTCAGAAGCAGCTAAGAACATGGCTACTCAAAGAAAGAGAGAAATCTTTGGGGAAGCAAAGATTTTGAAAGCTCAAAGAGATGAGTTGAGAGAACAAGTGCCACATTTGAGAGATGAGCAGGAATTGGCCAAGAAAATTCAGTCAAATATCAGTGATGAATGGTCAAAGCTTGGTGAAAAATTTAACGGCAGATTAAGGCATGCAAATTTTGATTAA 2421 0.3784 MMVDLPDEYMVHLKDDSFKKMKNLKILIVRNGNFFGSPQHLPNNLRLLDWMKYPSSLPSSFQPKKLVVLNLSGSRFTMQEPFKYLDSLTSMDLSSCELLTKLPEISGVPNLKELTLDYCTNLEEVHESVGFLEKLVEFRAYGCTKLKGFPSAIRLTSLRSLILNWCSSLQNFPAILGKMDNLMSISIEGTGIKQLPPSIGNLVGLQELSMTSCLSLKELPHNFDMLQSLTNLDMEGCPQLRNFLTKLTKVGESTHTFGNIQSLNLENCGLIDEDLPIIFNSFPKLASIVLSGNNFVALPSCMQECPCLELLHLDNCKELQQIPAFPPNIQYINAANCTSLTAESSNLLLNKQTFERWELQVMVPGAMVPEWFDHITKGEYITFWVREKFPAIIMCFALAVESEMKKIFNCEIRFYINGDEIYELEITRGFSEMVTDHVWLYDLRTHSSIHWGSLDLRLMDGWNQVEILCEKISGASNVSVSWCGVHVCKQETNMKDVLLTDPDSDIDSETSGSNILVVDHPVKAQPQSQVTSFIQTPQNNNSSTMVLPTTVDFLEKQTSLTINDADMEAFYAVLDNEISVVLLNNDSIVVSELDNKMPSEETRKALKTLQDYVTKEFSALLGPDEYSKMKDTLEYLTNLPAEDGISMEIRSLIIQVSRQFSHWSRDYTCENKKIESTTAKLLKVDELEEGLEANKTNFKEVVSLENELCNELAYLEERKRELEEQINAVKANISASEAAKNMATQRKREIFGEAKILKAQRDELREQVPHLRDEQELAKKIQSNISDEWSKLGEKFNGRLRHANFD* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01536 806 Coils Coil 747 774 - -
Lapu5g01536 806 Gene3D Ribonuclease Inhibitor 171 354 IPR032675 -
Lapu5g01536 806 SUPERFAMILY L domain-like 2 348 - -
Lapu5g01536 806 Coils Coil 705 739 - -
Lapu5g01536 806 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 37 182 - -
Lapu5g01536 806 Gene3D Ribonuclease Inhibitor 4 170 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01536 Lapu-Chr5 28594458 28600080 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01536 10 243 WRKY Transcription Factor Family AT4G12020 38.077 4.25e-29 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01536 - - psat:127127957 1077.77