Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01518 AAAAGCATTGGTTTAACGCGGGAAGAACAAAACCAGAGAGAGCAGAATCCATCAATGGCTGATTCCACTCCGACTGCAACTCCTTCAGATGACACCGAATCATGCATTTTCCAACGCACGGTCACCTTATACGATTGGTGGTTGATTAAAGCCAAAAGCGACTTCCAAAGAACGCGTTTAGCCGTCGGAGGCGTCTCATCCAGAAAGGATGAGGCAAAGCGCGTGTTTGTTTCTGCTCCAGTTATTAAAAGACACGACGAGTTTTCCCTCGAGACTGTGGATGGGAAATACGTTCTAATTCGTGGCCTCATCAACGAGCAGCGCACTATTGAAAACGATTTCGCCCCTGAGGTTTTCAATGGATTTTTATTTGGCTTCCCTGAAAACTGGGAAAGCTATGCTCTAGATTGCTCGAGAGTAGAATCAACCACTGGTACTGGTGCTCTTACTGATGTCGTACCAGCTAGCCGTCCAGAAATTTTATCTGATGGTACGGAGAATTGTATTCCTCCTTTTCTGGCATCACCAGATACGGTCCAGCAGAAGAAACAGTCTGCTTGTGGATTGCCTCTGAAGAATTCAAATAATGAGAACTATAATTCAGTGACGGCCTTGGATAATTGTGATGTAGTGGGACAGAAAAGTCCGAAAATACCTATTCCGTCACAATCACGGAGACAGCTAAGCACATCATCTGAACCGATAGTTAAAAAATCTGCATCCAGAATTTCTAGAACATTGTCACCCAAGACTGAAGGCTGTTATAAGAAAAAAGTTGGCAGAATACGGAATAAATCTGCTTCTGCTGTGAAAAGTTCACGATTAAAAGATCAAAGTCACTTGACCAAGGGAAGCCAACAGAAATTGTCCACTGCTTCTCCTGACTCATTGAGTTTCAGGACATCCAGATCTGGCAGGTTGCTTCTCCCTCCCCTAGAGTTTTGGCGCAATCAAATACCAATTTATAATGCGGATCATGAGCTTAAAGAAATTCAGGATGGCGCAGTTCTGATATCACCTTGTAGAGTTTCTTCACCATCATTGAGCAGGTTTACCAATCGGAAACGTGCCGCGTGA 1077 0.4401 KSIGLTREEQNQREQNPSMADSTPTATPSDDTESCIFQRTVTLYDWWLIKAKSDFQRTRLAVGGVSSRKDEAKRVFVSAPVIKRHDEFSLETVDGKYVLIRGLINEQRTIENDFAPEVFNGFLFGFPENWESYALDCSRVESTTGTGALTDVVPASRPEILSDGTENCIPPFLASPDTVQQKKQSACGLPLKNSNNENYNSVTALDNCDVVGQKSPKIPIPSQSRRQLSTSSEPIVKKSASRISRTLSPKTEGCYKKKVGRIRNKSASAVKSSRLKDQSHLTKGSQQKLSTASPDSLSFRTSRSGRLLLPPLEFWRNQIPIYNADHELKEIQDGAVLISPCRVSSPSLSRFTNRKRAA* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01518 358 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 212 334 - -
Lapu5g01518 358 MobiDBLite consensus disorder prediction 266 301 - -
Lapu5g01518 358 MobiDBLite consensus disorder prediction 1 32 - -
Lapu5g01518 358 MobiDBLite consensus disorder prediction 215 243 - -
Lapu5g01518 358 Pfam SANTA (SANT Associated) 41 133 IPR015216 -
Lapu5g01518 358 MobiDBLite consensus disorder prediction 217 243 - -
Lapu5g01518 358 MobiDBLite consensus disorder prediction 265 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01518 Lapu-Chr5 28433674 28437014 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu5g01518 SANTA 2.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01518 - - gsj:114370329 445.662