Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01492 ATGCTATCTTCAAATGCTGTTCCTTCATCTTCCCCTCTCACTTTCACCAAACCCAATCCCCATTTCTTCGTCAATGCATCTCCCCATCTTAAACCAAATCTTCTCACAAGGTTTCAGACCCAACACAGAGCCACTCCTCTCCAAAGTTCCAAACTTTCTTTCACGCCAACATCTCAGATCCAACATTCAATTGCAAAGTTAAGATCTTTCAACGGATTCCTCCCGCACACTCTTGAGCCATCGTCAAAACCCAGGCACCAAATCGTTAAGGCTGCTTCTGAAGCCAATCCTGAAGGAGAAAATGTTGCTCCCAATGTTGAAACACCCAGTGACCCCAAATCCAAGAATCTCAAACTTGGTCTGGTTTTTGGGTTATGGTACTTCCAGAACATCGTGTTCAACATTTACAACAAGAAAGTGTTAAACATATTCCCTTTCCCATGGCTTCTTGCCTCTTTCCAGCTCTTGGTTGGGTCCATTTGGATGCTTGTACTCTGGTCCTCAAAGCTCCAACCTTGTCCAAAAATCTCGAAACCCTTCATCGTTGCTCTCCTTGGACCTGCTTTGTTCCACACAATAGGCCACATTTCAGCCTGTGTATCATTCTCCAAGGTGGCTGTTTCCTTCACTCATGTCATCAAATCTGCAGAACCGGTTTTCTCTGTCATGTTTTCTTCTGTCCTTGGTGATAAGTACCCCATACAGGTTTGGCTCTCCATTCTACCCATTGTGCTTGGTTGTTCTTTAGCTGCTGTTACTGAGGTGTCTTTCAATGTACAAGGATTATGGGGTGCCCTTATTAGCAATGTTGGTTTTGTGTTGAGGAACATCTACTCTAAACGAAGTTTGCAGAATTTCAAGGAAGTTGATGGCTTGAACTTGTATGGTTGGATTACTATTGTTTCATTCCTCTACCTGTTTCCAGTGGCTATTTTTGTGGAAGGGTCTCAGTGGATCCCGGGGTATTACAAGGCTATTGAGGCTATAGGCAAAACATCCACATTTTATATCTGGGTGTTATTGTCTGGGGTTTTCTACCATCTTTATAACCAATCATCATACCAAGCACTGGATGAAATTAGCCCATTGACTTTCTCTGTGGGAAACACAATGAAAAGAGTGGTGGTGATTGTATCTACGGTTTTGGTGTTCAGGAATCCGGTTCGACCTCTTAATGCCCTTGGATCTGCCATTGCAATTCTTGGGACTTTCCTGTATTCACAGGCAACATCCAAAAAGAAAGAAAAGAAAATTGAAGAGGAAAAGAGTAGTTAG 1275 0.429 MLSSNAVPSSSPLTFTKPNPHFFVNASPHLKPNLLTRFQTQHRATPLQSSKLSFTPTSQIQHSIAKLRSFNGFLPHTLEPSSKPRHQIVKAASEANPEGENVAPNVETPSDPKSKNLKLGLVFGLWYFQNIVFNIYNKKVLNIFPFPWLLASFQLLVGSIWMLVLWSSKLQPCPKISKPFIVALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVMFSSVLGDKYPIQVWLSILPIVLGCSLAAVTEVSFNVQGLWGALISNVGFVLRNIYSKRSLQNFKEVDGLNLYGWITIVSFLYLFPVAIFVEGSQWIPGYYKAIEAIGKTSTFYIWVLLSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVSTVLVFRNPVRPLNALGSAIAILGTFLYSQATSKKKEKKIEEEKSS* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01492 424 PANTHER SOLUTE CARRIER FAMILY 35 118 413 - -
Lapu5g01492 424 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 117 417 IPR004696 GO:0016020|GO:0022857|GO:0055085
Lapu5g01492 424 Pfam Triose-phosphate Transporter family 117 407 IPR004853 -
Lapu5g01492 424 SUPERFAMILY Multidrug resistance efflux transporter EmrE 298 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01492 Lapu-Chr5 28176753 28178406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01492 24 422 Antiporters AT5G17630 68.810 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01492 K15283 - gmx:100101869 731.48