Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01476 ATGGCTTTTGGCTTGCCAATGAAGACTATTGAGCCATCTGTCTGTGGAGACAAGTTAGGTAACCTCATTTTGGAAGTAGCTAAAAACTTTGTTATATATATTGCGATGGTGGTTGCGTGCAATGGTTTACATTTTCTACTAAAGCCTTATAAACAACCTCGCATTACTTCAGACATAATTGTAGGACTAGTTGTGGGCAACATTGGGTTCGTACGTAGACTGTTTGAGAAATTCAACCTAACGTTTGGATTTATCATTGATTTTGGAATGACATGTTACATGTTTACCCTGGGAATAGAGATGGATCCTTATGTACTATTTGCAAGACCAAATAGGTATACTAAACTTTCTGCAGCAGGAATTATATGCTCGTTCATCCTGGGAGGTCTTGTGACCCCAATGTTGAAATACTTCCCAGATGAAAACAAGCTACTAGAGTTCACCCTAGCCTTCTCCACAGTGATTTCTAGCACAGACTCACCTGTGTTGACCCGTTTAATAACCCAGCTGAAAATAGGAAAATCGGATATTGGGAAGCTCATCATTGGAGCAGGGGTGCACTCAGATTTTGTGTGCTGTTTGATCCTTTCCCTTGGCTACATAGTTGTGCCAATGCCAGAGTATTGTAATGATTTGCAAGGAAAATTGGAGGTTAAGAAGACCATTAATGTAGTGTGTGTAGTGCTGGTGCAGGTAGGGTTCACAGCCATGGTGTCACCAATGCTTATGAAGTGGGTTAGCAGTGAGAACCCTGAAGGTAGACCCATGAAAGGTCCACACTTGGTACTCTCACTTGCCTTCATGGTTTTAATGTGTGCCTCCACCACTATGTATTATTATAATCCAATTTTAAGTGCTTTTCTGGTAGGACTCTGTGTTCCCAGGGAGGGTAGAGTTTCCAAATGGGTTATCACCAGAATCAACTACATGTTGACCACTATTTTCTTTCCCATCTTTTTCTTGTGGATGGGCTATGAATCTAATTTCAGGCAGTTTGAAGCACGCCATTTTTCAACATGGATAAGACTGATTTTGCTTTTGGGAGTGGCAACGGCTGGAAAAGTTGCTGGAACAGTCATCTATGGGGCCATGTCGGGCTTTCACTGGCCTGAATCGGTTGCAATAGGAATGCTCCTTGTTACTAAGGGCCATTTGCAGATCTACTTAGCAATGAAAGTGATAGGTTGTGGTGGTCTAACTACTTCCACAGGCATTGTGATGGTAATTGGAATCTTTTTAACAGCTTTGCCTGCATCAACAATTGTGGCAAACATCATTAGACGAGCAAGGAAGAGGGCACCTACTCATCGTTTGGGACTTCAAATGCTTGACCCGTCGAGTGAGCTAAGGATCCTCCTGTGTGTTCAAGGACCTCAAAATGTTCCTGCTTCCATCAACTTGTTGGAGATCACAAAAGGGACGGCTGACACGGGCATTGTGGTGTATGTCTCTGACATGATTGAACTCACTGCTGAAATATCAGACCCATTAGAGAGGGATGAAACAATGCACACAGCAACAGTGAAAGACAGGGAAGTCATGGATATGAGAGACCAAGTAACTAACTCATTCCAAGCCTATGTGGCGGAGAATGATGAGGGAATTACACTCAAAAGAACCTTGGCACTCTCAACAATCACTAACATGCCACAAGACATTTGCATTTTGGCAGAGGACTTGATGATTGCCCTCATCATATTGCCATTCCACAGGAGCCAGCGTGTCGATGGCAGGTTGGATGGTGGTAATGCAGGGTTCAGATACGTGAACGGAAAGGTACTGAGAAGTGCCCCTTGTTCTGTTGGGATTCTAGTAGATAGAGGCCTTGGATCTCTTGAACATATAGCAAGATGTGAAGTAACAGTAAATGTGGCAGTGATATTCATTGGTGGAAAAGATGATAGAGAAGCACTTGCCTACGCTAGCCGTGTAGCGCAGCATTCACAAGTTAAGCTGACAGTGATAAGGTTCCTGGTAGATAGCAGTGTGGAGTCATCAGCATTATACAGGATCATCCTTCCAGAGCAGGAGAAAGAGATGCAATTGGATGATGAATGCTTTACACAGTTCTACGAAAGGCATGTGATTGGGGGTCGGATTTCCTACATGGAGAAGCATCTTGCAAGTGCTACTGAGACCTTCTCCACTCTGAGATCCTTTGAAGGGCAATACTCATTGGTGATTGTTGGAAGGGAAGGAGGAATGAACTCAATATTGACAAGGGGCATGAATGATTGGCAACAGTGTCCTGAATTGGGACCAATAGGGGATGTTCTTTCTGGATCAGACTTCTCAATGACTGTTTCTGTTTTGATCATTCAACAACATAGACTTAGAGGAGAAATAGATGGGTTGGATGAAGACTTCTCTATCATATAA 2379 0.4317 MAFGLPMKTIEPSVCGDKLGNLILEVAKNFVIYIAMVVACNGLHFLLKPYKQPRITSDIIVGLVVGNIGFVRRLFEKFNLTFGFIIDFGMTCYMFTLGIEMDPYVLFARPNRYTKLSAAGIICSFILGGLVTPMLKYFPDENKLLEFTLAFSTVISSTDSPVLTRLITQLKIGKSDIGKLIIGAGVHSDFVCCLILSLGYIVVPMPEYCNDLQGKLEVKKTINVVCVVLVQVGFTAMVSPMLMKWVSSENPEGRPMKGPHLVLSLAFMVLMCASTTMYYYNPILSAFLVGLCVPREGRVSKWVITRINYMLTTIFFPIFFLWMGYESNFRQFEARHFSTWIRLILLLGVATAGKVAGTVIYGAMSGFHWPESVAIGMLLVTKGHLQIYLAMKVIGCGGLTTSTGIVMVIGIFLTALPASTIVANIIRRARKRAPTHRLGLQMLDPSSELRILLCVQGPQNVPASINLLEITKGTADTGIVVYVSDMIELTAEISDPLERDETMHTATVKDREVMDMRDQVTNSFQAYVAENDEGITLKRTLALSTITNMPQDICILAEDLMIALIILPFHRSQRVDGRLDGGNAGFRYVNGKVLRSAPCSVGILVDRGLGSLEHIARCEVTVNVAVIFIGGKDDREALAYASRVAQHSQVKLTVIRFLVDSSVESSALYRIILPEQEKEMQLDDECFTQFYERHVIGGRISYMEKHLASATETFSTLRSFEGQYSLVIVGREGGMNSILTRGMNDWQQCPELGPIGDVLSGSDFSMTVSVLIIQQHRLRGEIDGLDEDFSII* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01476 792 Gene3D - 27 435 IPR038770 -
Lapu5g01476 792 FunFam Cation/H(+) antiporter 28 27 435 - -
Lapu5g01476 792 PANTHER CATION/H + ANTIPORTER 30 777 - -
Lapu5g01476 792 Pfam Sodium/hydrogen exchanger family 32 420 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Lapu5g01476 792 Gene3D - 465 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01476 Lapu-Chr5 27951230 27954489 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01476 8 792 Antiporter Super Family AT3G52080 47.139 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01476 K26731 - gmx:100786469 1332.78