Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01472 ATGGCATTCATCGATAAGCAAACGGAAGAAGAAAAGGAACCATTCAGAATGGAAGAAGAAGAAGAAGATGAAGACGAAGACGAAGAAGAAGAAGAAGAAGCATGGGACGATTGGGAAGGAGAGCGAGAATCGGAATTCGCGTGTCTCTTCTGTGACTCGCAGTACAGTTCGTGCGGTTCCTTGTTCGACCATTGCGCCTCATTTCACCATTTCGATTTCCACGCGATTAGAACAACTCTCAACCTGGATTTCTATGCTTCCTTCAAGCTCATCAACTTCGTCCGCTCTCAGGTGGCAGAGAACAGATGTTGGAGTTGTGGAATAACATGTCAGTGCAAGCGGGACTTGCAGAGTCATCTGCATGATGTAGTTGACTTTAATGAGATAAAGACTCTATGGAATGATGATAAATATCTAATACCTTTCATGCAAGATGATTCTCTGCTGTACAGTTTTGGTGAATGTGACGAAGAAGGTGAAGATGAGCAAATTTCACCAATTGATGAAGATCTTATAAAGGATTTGATGAACATTGATGAGGGAATCTGTAACGATCATGATTCTGTGGAAAAAGTGGCAGTTGATGATGTAAAACATGATGCTTCTGTTTCTATTGATCGTTTGAATAGGGATAGTTCTTCACACAGGGAACTTATTAATGGTAATGACTCAAAGGGACATGCTTTGTGTAGTGATAAGGATTCGAAAAAAGGACCTTTAATTGCTAATTCTCAAAATCACATTGCAAAGCATATTAAGAAGGTTAATGAAAGTTATTTTGGGTCATACAGTTCATTCGGTATCCATCGAGAGATGTTAAGTGATAAGGTGAGAATGGATGCTTATGGTCAAGCAATTTTGAAGAATCCATCTCTACTAAAGGGAGCTGTTGTTATGGATGTAGGTTGTGGAACTGGAATCCTCAGCCTATTTTCGGCAAAAGCAGGAGCTTCCAGGGTTATTGCTGTTGAGGCTAGTGCCAAGATGGCAGCAGTGGCATCTCAGATTGCAAAAGCTAATGGTCTTGGGTGGAATGAAAGCCAAAGTGGAATTGATGGCCTCCAAAGTGGAGTCATAGAAGTGGTTCATGGTATGGTTGAAGAGATTGATAAAACAGTTGAACTTAAACCTCACAGTGTTGATGTATTGCTAAGTGAATGGATGGGATATTGCTTGCTATATGAATCCATGCTTGGTTCAGTGCTTTATGCACGGGACCGGTGGTTGAAGCCTGGTGGTGCCATTCTTCCTGACACAGCAACTATTTTTGTTGCAGGATTTGGAAAAGAAGCCACAAGTCTTCCGTTTTGGGAAAATGTGTATGATTTTGACATGTCTTGCATTGGGAAGGAACTTGTCATAGATGCTGCCCAAATTCCTATAGTTGATGTTCTGGACTCACAAGATTTAGTTACCAGTTCTGCTACTCTACAGTCTTTTGACTTGGCAACCATGAAGCCCAATGAAGTGGATTTCACTGCGACTACAACTTTGGAATTGAAACCAAGTGCTTCAGCAACATGGTGCTGGTGCTATGGTGTTGTCCTATGGTTTGAAACTGGTTTTACGAGGAGATTCTGCCGAGAAACACCAGCTGTGTTATCCACATCCCCTTACACACCAAGAACACATTGGTCACAAACAATCTTAACCTTTCGAGAACCTATTGCAATGGGATTTGGAAAAGAAAAGAGGGGTAAACTGGAAACAATTGGCACTGAGGTGTATCCTGCAGTAAATATCGATTTACGCATTAGCATTGTCCGTTCTACAGAGCATCGCAGCATTGACATTTCCTTAGAAGCTGCCGGTGTTGGCCCTGATGGTCAGAAACGTAGTTGGCCTGCTCAGCTTTTCAATCTGCAGTAG 1869 0.4195 MAFIDKQTEEEKEPFRMEEEEEDEDEDEEEEEEAWDDWEGERESEFACLFCDSQYSSCGSLFDHCASFHHFDFHAIRTTLNLDFYASFKLINFVRSQVAENRCWSCGITCQCKRDLQSHLHDVVDFNEIKTLWNDDKYLIPFMQDDSLLYSFGECDEEGEDEQISPIDEDLIKDLMNIDEGICNDHDSVEKVAVDDVKHDASVSIDRLNRDSSSHRELINGNDSKGHALCSDKDSKKGPLIANSQNHIAKHIKKVNESYFGSYSSFGIHREMLSDKVRMDAYGQAILKNPSLLKGAVVMDVGCGTGILSLFSAKAGASRVIAVEASAKMAAVASQIAKANGLGWNESQSGIDGLQSGVIEVVHGMVEEIDKTVELKPHSVDVLLSEWMGYCLLYESMLGSVLYARDRWLKPGGAILPDTATIFVAGFGKEATSLPFWENVYDFDMSCIGKELVIDAAQIPIVDVLDSQDLVTSSATLQSFDLATMKPNEVDFTATTTLELKPSASATWCWCYGVVLWFETGFTRRFCRETPAVLSTSPYTPRTHWSQTILTFREPIAMGFGKEKRGKLETIGTEVYPAVNIDLRISIVRSTEHRSIDISLEAAGVGPDGQKRSWPAQLFNLQ* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01472 622 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 256 579 IPR025799 GO:0016274|GO:0018216
Lapu5g01472 622 MobiDBLite consensus disorder prediction 1 39 - -
Lapu5g01472 622 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 49 604 IPR025799 GO:0016274|GO:0018216
Lapu5g01472 622 Pfam Methyltransferase domain 298 413 IPR041698 -
Lapu5g01472 622 Gene3D Vaccinia Virus protein VP39 248 417 IPR029063 -
Lapu5g01472 622 SUPERFAMILY beta-beta-alpha zinc fingers 30 165 IPR036236 -
Lapu5g01472 622 Gene3D - 419 618 - -
Lapu5g01472 622 FunFam Protein arginine N-methyltransferase 6 252 417 - -
Lapu5g01472 622 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 262 568 IPR029063 -
Lapu5g01472 622 MobiDBLite consensus disorder prediction 14 39 - -
Lapu5g01472 622 CDD AdoMet_MTases 298 416 - -
Lapu5g01472 622 Pfam C2H2 type zinc-finger (2 copies) 48 122 IPR041661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01472 Lapu-Chr5 27925122 27930501 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01472 24 621 C2H2 Transcription Factor Family AT3G12270 54.517 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01472 K11436 - gmx:100781879 1001.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g01472 5 27925122 27930501 Lapu5g01472 5 27925122 27930501 ECH