Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01470 ATGAAAATCCCGTGTTGTTCGGTTTGCCAAACGCGATACAACGAGGAGGAGAGAGTTCCCCTGCTGCTCCAATGCGGCCATGGCTTCTGCAGAGAGTGTCTCTCTAGAATGTTCGCGGCGTCTTCGGACGCCACGCTGGCGTGTCCGAGGTGCCGACACGTGTCAACCGTGGGGAACTCCGTGCAGGCGCTGCGGAAGAACTACGCCGTGCTCGCGCTGCTCCACACCGGGACCGGCGCTGCCAACGGCGGTGGGGGAGGAGGGGGAGGGGCGAATTTCGACTGCGACTACACCGACGAGGAGGAAGAGGAGGAGGACGGCGGGGGGGAAGAGGACGAGGACGACGAGAAGCGGAGACGGAACAGCCGCGAGTCGCAGGCGTCGAGTTCCGGCGGGTGCGAGCCGGTGATCGAGGTCGGCGGCGGCGCGCACCAGGACCTGAAGTTGGTGCGGCGGATTGGGGAGGGGAGGAGGGCGGGAGTGGAGATGTGGATGGCGGTGATCGGCGGTGGAGGGGAGGGAGGACGGCGGTGCCGGCACAGCGTGGCGGTGAAGAAGGTGGCGGTGGTGGAGGGGATGGATTTGGATTGGGTTCAGGGGAAGTTGGAGGATTTGCGTAGGGCTTCGATGTGGTGCAGGAATGTGTGCACTTTCCATGGGACAATGAGGGTGGAGGACAGTTTGTGCCTCGTGATGGATAAGTGCTATGGATCGGTTCAGTCCGAGATGCAGCGCAATGAGGGAAGGCTCACTTTGGAACAAGTCCTAAGATACGGGGCAGACATTGCCCGAGGAGTTGTTGAGCTTCATGCTGCAGGCGTGGTCTGCATGAATTTAAAACCATCCAATCTTCTTCTTGATGCCAATGGTCACGCTGTGGTTTCTGATTACGGACTTGCGACAATTGTGAAGAAGCCCTCCTGTTGGAAGGCACGACCAGAGTGTGACTCTGCAAAGATCCATTCCTGTATGGAATGTATAATGCTCAGCCCACATTATACAGCACCGGAGGCTTGGGAACCTGTGAAGAAGTCGTTAAATTTGTTTTGGGACGATGGAATAGGTATATCTTCCGAATCAGATGCCTGGAGTTTTGGTTGTACATTGGTGGAGATGTGCACGGGTTCCATTCCTTGGGCAGGTTTAAGTGCAGAGGAAATCTATCGAGCTGTTGTTAAAGCTAAGAAACTGCCTCCACAGTATGCTAGTGTGGTTGGAGGTGGAATTCCGAGGGAATTGTGGAAGATGATTGGAGAGTGCTTGCAATTCAAGCCATCTAAAAGGCCTACTTTTAGTGCAATGCTGGCAATATTTCTCCGTCATTTGCAGGAAATACCACGCAGCCCTCCTGCAAGCCCTGATAATGGCTTAGATAATAAGGTCTCTGTATCAACTGTGATGGAGCCTTCACCAGTACCTGAATTGGAAGTTCCTCAGGAAAGCCCTAACCATCTTCATCGACTTGTGTCTGAAGGAGATACTACAGGTGTTAGAGATCTTCTTGCGAAGGCTGGATTAGAAAATGGCAGCAACTACTTATCTTCGCTATTGGAAGCTCAAAATGGTGATGGGCAAACAGCTCTCCACTTAGCTTGTAGAAGGGGCAGTGCAGAACTTGTTGAGACAATTTTGGAGTATAGAGAAGCAAATGTTGATGTATTGGACAAGGATGGAGATCCTCCTCTTGTTTTTGCATTAGCAGCTGGATCCCCAGAATGTGTTCGTAGCCTTATCAAAAGAAATGCTAATGTGCGGTCAAGATTGAGAGATGGTTTTGGTCCATCTGTAGCTCACGTTTGTGCCTATCATGGCCAGCCAGATTGTATGCGAGAATTGGTATTAGCTGGAGCTGATCCCAATGCAGTGGATGATGAAGGTGAATCTGTTCTGCATAGAGCAATTTCCAAGAAGTACACAGACTGTGCACTTGTGATATTGGAGAATGGAGGATGTAAATCAATGTCCATCGTGAATTCAAAGAACCTGACACCACTGCACTTGTGTGTGGCAACATGGAATGTTGCTGTTGTGAAGAGATGGGCGGAAGTTGCAACTTCTGATGAGATATCTGAAGCAATTGACATACCAAGCCCTATTGGCACTGCATTGTGCATGGCAGCTGCTTCTAAGAAAGACCATGAGAATGAGGGCAGAGAACTGGTGCAGATACTGCTTGCAGCGGGAGCTGATCCGTCTGCTCAAGATTCACAAAATGGGAGGACAGCATTGCATACAGCTGCAATGACTAATGATGTGGACTTGGTTCAGGTTATTCTGGCTGCTGGGGTTGATGTGAACATTCGCAATGTGCACAACAGTATACCTCTTCACTTGGCCTTAGCTCGGGGTGCAAAGGCATGTGTTGGATTGCTTCTAGCTGCTGGAGCGGATTATAATTTGCAGGATGATGATGGTGACAATGCTTTCCATATAGCTGCTGAGACAGCAAAAATGATTCGTGAAAATATGAACTGGCTTATTATTATGCTAAAGAATCCTGATGCCGACATTGAAGTCAGAAACCACAGTGGCAAGACGGTACGTGACATTTTAGAGGCTCTCCCCCGAGAATGGTTATCTGAAGATCTGATGGAAGCACTTGCAAATAGGGGAGTTCATTTGTCTCCTACATCATTTGAAGTGGGAGACTGGGTGAAGTTTAAAAAATCTGTCACAACTCCAACGCATGGATGGCAAGGCGCTAATCTACATAGTGTTGGTTTTGTGCAAAGTGTTCCAGACAAAGATAATCTCATTGTTTCATTTTGTTCTGGAGAGGTTCATCTTCTAGTTAATGAAGTTATAAAAGTCATTCCATTGGACAGGGGACAACATGTACAACTGAAAGAAGATGTAAAAGAGCCTAGATTTGGTTGGCGTGGGCAGTCACGTGACAGCATTGGGACAGTGTTATGTGTTGATGATGATGGAATCCTCCGTGTTGGGTTTCCTGGAGCATCCAGAGGATGGAAAGCTGACCCAGCAGAGATGGAACGTGTTGAAGAATTCAAGGTTGGAGACTGGGTTCGCATTCGTCCAACTCTTACATCTGCAAAGCATGGACTAGGATCTGTGACTCCTGGAAGCATTGGCATTGTATATTGTATCCGACCAGACAGTAGTCTGTTAATAGAACTAAGTTATCTTCCAAATCCATGGCATTGTGAGCCAGAGGAGGTGGAGCACGTTGCTCCTTTTAGGATTGGTGATAGGGTATGTGTGAAACGATCTGTTGCGGAACCTAGATATGCTTGGGGTGGTGAGACACATCATAGTGTTGGAAGAATAAGTGAGATTGAGAATGATGGTCTCTTAATAATTGAAATAACAAATCGACCCATACCATGGCAAGCTGATCCATCGGATATGGAGAAGGTGGAAGATTTCAAGGTTGGAGATTGGGTAAGAGTGAAAGCTTCTGTGTCTTCACCAAAATATGGATGGGAAGATATTACTAGGAATAGTATTGGTGTAATTCATGGCTTGGAGGAGGATGGTGACATGGGTGTAGCTTTTTGCTTCAGAAGTAAGCCTTTTTCTTGCTCAGTCACTGATGTGGAGAAAGTTCCTCCATTTGAGGTGGGACAAGAAATTCATGTGATGCCATCAGTTACTCAGCCCCGTCTTGGGTGGTCAAATGAATCATCAGCTACTGTTGGAAAAATAGTGAGGGTCACTGGTAGGCAGAGCTTGTGGAAAGTTTCTCCTGGAGATGCAGAGCGGCTTCCAGGATTTGAGGTTGGGGATTGGGTTCGCTCAAAACCAAGCCTGGGAACCAGACCAAGCTATGACTGGAATAGTGTTGGGAGAGAAAGTTTAGCTGTTGTGCACAGTGTGCAGGATTCTGGATACTTGGAGTTGGCTTGCTGTTTTCGCAAAGGGAAGTGGATCACTCATTATACAGATGTTGAAAGGGTTCCTAGCTTTAAAGTTGGGCAGTATGTTAGGTTCCGAACTGGTTTGGTTGAACCAAGGTGGGGATGGAGAGGAGCTCGGCCTGAATCTCAAGGGGTTATAACCAGTATTCATGCCGATGGAGAAGTCAGGGTCGCATTTTTTGGTCTTCCAGGACTGTGGAGAGGAGATCCTTCAGACCTTGAGATTGAACAAATGTTTGAAGTGGGAGAGTGGGTGAGGTTGACAGACAATGCAAATGATTGGAAATCAATTGGGCCAGGTAGTGTTGGTGTCGTTCAAGGAATAGGGTATGAAGGAGATGAATTGAACAGAAGTATTTTTGTTGGATTTTGTGGGGAGCAAGAAAAGTGGGTAGGACCAAGTTCCCATCTTGAAAGATTTGACAAACTCTCTGTTGGGCAGAAGGTTAGAGTGAAACAATATGTGAAGCAACCAAGATTTGGGTGGTCAGGGCATACCCATGCTAGTCTTGGGACCATACAGGCTATTGATGCTGATGGAAAGCTTCGAATATACACTCCAGCAGGATCCAGAACATGGATGTTGGACCCATCAGAAGTGGAGGTGGTAGAAGAGAAGGAGCTCTGTATTGGTGACTGGGTAAGGGTTAAAACATCGGTTTCAACCCCAACCCACCATTGGGGGGAAGTGAGTCATTCAAGCATTGGAGTTGTGCATCGAATGGAAGATGAGGATCTTTGGGTGGCTTTCTGTTTTATGGAGAGGCTGTGGCTTTGTAAGGCATGGGAAATGGAACGGGTTAGGCCATTTAAAGTGGCTGACAAGGTAAGGATCAGAGATGGACTGGTGACCCCACGTTGGGGATGGGGAATGGAGACACATGCCAGCAAGGGACAGGTTGTAGGGGTAGATGCAAATGGCAAACTAAGAATAAAATTCCGGTGGAGGGAAGGGAGGCCCTGGATAGGAGATCCTGCAGATCTTGCCCTTGATGAGGACTGA 4881 0.4821 MKIPCCSVCQTRYNEEERVPLLLQCGHGFCRECLSRMFAASSDATLACPRCRHVSTVGNSVQALRKNYAVLALLHTGTGAANGGGGGGGGANFDCDYTDEEEEEEDGGGEEDEDDEKRRRNSRESQASSSGGCEPVIEVGGGAHQDLKLVRRIGEGRRAGVEMWMAVIGGGGEGGRRCRHSVAVKKVAVVEGMDLDWVQGKLEDLRRASMWCRNVCTFHGTMRVEDSLCLVMDKCYGSVQSEMQRNEGRLTLEQVLRYGADIARGVVELHAAGVVCMNLKPSNLLLDANGHAVVSDYGLATIVKKPSCWKARPECDSAKIHSCMECIMLSPHYTAPEAWEPVKKSLNLFWDDGIGISSESDAWSFGCTLVEMCTGSIPWAGLSAEEIYRAVVKAKKLPPQYASVVGGGIPRELWKMIGECLQFKPSKRPTFSAMLAIFLRHLQEIPRSPPASPDNGLDNKVSVSTVMEPSPVPELEVPQESPNHLHRLVSEGDTTGVRDLLAKAGLENGSNYLSSLLEAQNGDGQTALHLACRRGSAELVETILEYREANVDVLDKDGDPPLVFALAAGSPECVRSLIKRNANVRSRLRDGFGPSVAHVCAYHGQPDCMRELVLAGADPNAVDDEGESVLHRAISKKYTDCALVILENGGCKSMSIVNSKNLTPLHLCVATWNVAVVKRWAEVATSDEISEAIDIPSPIGTALCMAAASKKDHENEGRELVQILLAAGADPSAQDSQNGRTALHTAAMTNDVDLVQVILAAGVDVNIRNVHNSIPLHLALARGAKACVGLLLAAGADYNLQDDDGDNAFHIAAETAKMIRENMNWLIIMLKNPDADIEVRNHSGKTVRDILEALPREWLSEDLMEALANRGVHLSPTSFEVGDWVKFKKSVTTPTHGWQGANLHSVGFVQSVPDKDNLIVSFCSGEVHLLVNEVIKVIPLDRGQHVQLKEDVKEPRFGWRGQSRDSIGTVLCVDDDGILRVGFPGASRGWKADPAEMERVEEFKVGDWVRIRPTLTSAKHGLGSVTPGSIGIVYCIRPDSSLLIELSYLPNPWHCEPEEVEHVAPFRIGDRVCVKRSVAEPRYAWGGETHHSVGRISEIENDGLLIIEITNRPIPWQADPSDMEKVEDFKVGDWVRVKASVSSPKYGWEDITRNSIGVIHGLEEDGDMGVAFCFRSKPFSCSVTDVEKVPPFEVGQEIHVMPSVTQPRLGWSNESSATVGKIVRVTGRQSLWKVSPGDAERLPGFEVGDWVRSKPSLGTRPSYDWNSVGRESLAVVHSVQDSGYLELACCFRKGKWITHYTDVERVPSFKVGQYVRFRTGLVEPRWGWRGARPESQGVITSIHADGEVRVAFFGLPGLWRGDPSDLEIEQMFEVGEWVRLTDNANDWKSIGPGSVGVVQGIGYEGDELNRSIFVGFCGEQEKWVGPSSHLERFDKLSVGQKVRVKQYVKQPRFGWSGHTHASLGTIQAIDADGKLRIYTPAGSRTWMLDPSEVEVVEEKELCIGDWVRVKTSVSTPTHHWGEVSHSSIGVVHRMEDEDLWVAFCFMERLWLCKAWEMERVRPFKVADKVRIRDGLVTPRWGWGMETHASKGQVVGVDANGKLRIKFRWREGRPWIGDPADLALDED* 1627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01470 1626 SUPERFAMILY RING/U-box 5 58 - -
Lapu5g01470 1626 ProSiteProfiles Ankyrin repeat region circular profile. 523 545 - -
Lapu5g01470 1626 Pfam Mind bomb SH3 repeat domain 1003 1123 IPR040847 -
Lapu5g01470 1626 Pfam Mind bomb SH3 repeat domain 1502 1621 IPR040847 -
Lapu5g01470 1626 Pfam Mind bomb SH3 repeat domain 1372 1493 IPR040847 -
Lapu5g01470 1626 Pfam Mind bomb SH3 repeat domain 1245 1366 IPR040847 -
Lapu5g01470 1626 Pfam Mind bomb SH3 repeat domain 879 923 IPR040847 -
Lapu5g01470 1626 Pfam Mind bomb SH3 repeat domain 933 997 IPR040847 -
Lapu5g01470 1626 MobiDBLite consensus disorder prediction 95 112 - -
Lapu5g01470 1626 Pfam Protein kinase domain 179 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01470 1626 MobiDBLite consensus disorder prediction 91 139 - -
Lapu5g01470 1626 ProSiteProfiles Ankyrin repeat region circular profile. 738 769 - -
Lapu5g01470 1626 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Lapu5g01470 1626 Gene3D - 692 871 IPR036770 -
Lapu5g01470 1626 FunFam E3 ubiquitin-protein ligase KEG 463 693 - -
Lapu5g01470 1626 ProSiteProfiles Protein kinase domain profile. 147 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01470 1626 Gene3D - 474 691 IPR036770 -
Lapu5g01470 1626 ProSiteProfiles Ankyrin repeat profile. 738 770 IPR002110 GO:0005515
Lapu5g01470 1626 SUPERFAMILY Ankyrin repeat 519 816 IPR036770 -
Lapu5g01470 1626 FunFam E3 ubiquitin-protein ligase KEG 236 452 - -
Lapu5g01470 1626 CDD RING-HC_KEG-like 3 59 - -
Lapu5g01470 1626 Pfam RING-type zinc-finger 6 49 IPR027370 -
Lapu5g01470 1626 ProSiteProfiles Ankyrin repeat profile. 592 624 IPR002110 GO:0005515
Lapu5g01470 1626 ProSiteProfiles Ankyrin repeat region circular profile. 771 803 - -
Lapu5g01470 1626 Pfam Ankyrin repeats (3 copies) 486 585 IPR002110 GO:0005515
Lapu5g01470 1626 Pfam Ankyrin repeats (3 copies) 598 671 IPR002110 GO:0005515
Lapu5g01470 1626 Pfam Ankyrin repeats (3 copies) 707 802 IPR002110 GO:0005515
Lapu5g01470 1626 Gene3D Transferase(Phosphotransferase) domain 1 235 457 - -
Lapu5g01470 1626 PRINTS Ankyrin repeat signature 720 734 IPR002110 GO:0005515
Lapu5g01470 1626 PRINTS Ankyrin repeat signature 524 539 IPR002110 GO:0005515
Lapu5g01470 1626 SUPERFAMILY Protein kinase-like (PK-like) 139 459 IPR011009 -
Lapu5g01470 1626 ProSiteProfiles Ankyrin repeat profile. 557 589 IPR002110 GO:0005515
Lapu5g01470 1626 SMART ANK_2a 698 733 IPR002110 GO:0005515
Lapu5g01470 1626 SMART ANK_2a 523 553 IPR002110 GO:0005515
Lapu5g01470 1626 SMART ANK_2a 804 839 IPR002110 GO:0005515
Lapu5g01470 1626 SMART ANK_2a 625 656 IPR002110 GO:0005515
Lapu5g01470 1626 SMART ANK_2a 738 767 IPR002110 GO:0005515
Lapu5g01470 1626 SMART ANK_2a 660 691 IPR002110 GO:0005515
Lapu5g01470 1626 SMART ANK_2a 771 800 IPR002110 GO:0005515
Lapu5g01470 1626 SMART ANK_2a 592 621 IPR002110 GO:0005515
Lapu5g01470 1626 SMART ANK_2a 557 586 IPR002110 GO:0005515
Lapu5g01470 1626 FunFam E3 ubiquitin-protein ligase KEG 737 870 - -
Lapu5g01470 1626 SMART ring_2 6 51 IPR001841 -
Lapu5g01470 1626 ProSiteProfiles Ankyrin repeat profile. 771 803 IPR002110 GO:0005515
Lapu5g01470 1626 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 80 IPR013083 -
Lapu5g01470 1626 ProSiteProfiles Ankyrin repeat profile. 523 556 IPR002110 GO:0005515
Lapu5g01470 1626 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
Lapu5g01470 1626 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 1 1625 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01470 Lapu-Chr5 27883390 27899388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01470 139 471 MAP Kinase Kinase Kinase AT1G53570 24.118 3.58e-19 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Lapu5g01470 Pkinase 6.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01470 K16279 - gmx:100777576 3102.38