Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01466 ATGGAGGATAAACCAGAGAAGCAAGACGATAGCCACCCATCTCTCCTCCTCCCTAATCATGGCACCATCAAGGAAGAGAACTCTCCAAGGAAAGCCATTGGTGGTGGCAGTGATAGGCTGAAGAGGGATGAGTGGAGTGAAGGGGCTGTGTCAACCCTTCTTGAGGCCTATGAGGCCAAATGGGTGCTCAGAAATAGAGCCAAACTCAAGGGCCATGATTGGGAAGATGTTGCAAAACATGTCTCATCAAGAGCCAACTCCACCAAGTCACCAAAGACACAGACTCAGTGCAAGAACAAGATTGAGTCCATGAAGAAAAGGTACAGATCAGAGTCTGCAACCACTGCTGATGCATCATCTTGGCCTTTGTACTCTCGCCTTGATCTTCTCCTGCGTGGCACAGGACCAATATCTTCACTCCCACCACCACCACCAACACTAAATCCAACACCACCAACAACAACAATAGCACCTTCATTTCAACCACCTCCACATGCTTCCACCAATAATAACCAGGCTTTGGTGTTGTTGGAGCCTCCTTCACTTGCTGTGTCACAAACTCCTCCTTCTGTTGCTCCTCCACCACTCACAATTGCACAAAACTCTCATGGATCCAATGGTGTTGAAAGACTAGCAAAGGAAGATGGGTTAGGAGCCAAGTCATCTGAGCATGTATCTAACAAGAATCTAATGGACTCGGATAGTAGCACACCTGCTCTATACAGTGAAAAGGACAAGGTGAGATGCAACAAGAGGAAGATGAAAAGTGAGAACAACACCAAAAGGGTGAGAAGGAATAGTAATAGTAATAACAATCACAATCACAGCGAAGACATGGACATAGCAGACAGCATAAGGTGGCTAGCAGAAGTGGTGGTGAGGTCAGAACAAACAAGAATGGACACAATGAAAGAAATTGAGAAGATGAGGGTTGAAGCTGAGGCAAAGAGAGGGGAGATGGAGCTCAAGAGAACTGAAATCATAGCCAATACTCAACTAGAGATTGCTAGGATCTTTGCAAGTGTCAATAAAGGTGTTGATTCTTCACTAAGAATTGGAAGAAGTTAA 1068 0.4541 MEDKPEKQDDSHPSLLLPNHGTIKEENSPRKAIGGGSDRLKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVAKHVSSRANSTKSPKTQTQCKNKIESMKKRYRSESATTADASSWPLYSRLDLLLRGTGPISSLPPPPPTLNPTPPTTTIAPSFQPPPHASTNNNQALVLLEPPSLAVSQTPPSVAPPPLTIAQNSHGSNGVERLAKEDGLGAKSSEHVSNKNLMDSDSSTPALYSEKDKVRCNKRKMKSENNTKRVRRNSNSNNNHNHSEDMDIADSIRWLAEVVVRSEQTRMDTMKEIEKMRVEAEAKRGEMELKRTEIIANTQLEIARIFASVNKGVDSSLRIGRS* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01466 355 FunFam Trihelix transcription factor ASIL2 45 110 - -
Lapu5g01466 355 MobiDBLite consensus disorder prediction 222 238 - -
Lapu5g01466 355 MobiDBLite consensus disorder prediction 216 278 - -
Lapu5g01466 355 MobiDBLite consensus disorder prediction 135 170 - -
Lapu5g01466 355 Coils Coil 303 323 - -
Lapu5g01466 355 MobiDBLite consensus disorder prediction 1 41 - -
Lapu5g01466 355 Gene3D - 45 110 - -
Lapu5g01466 355 MobiDBLite consensus disorder prediction 137 159 - -
Lapu5g01466 355 MobiDBLite consensus disorder prediction 239 262 - -
Lapu5g01466 355 MobiDBLite consensus disorder prediction 184 203 - -
Lapu5g01466 355 MobiDBLite consensus disorder prediction 24 41 - -
Lapu5g01466 355 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 28 341 IPR044823 -
Lapu5g01466 355 Pfam Myb/SANT-like DNA-binding domain 42 129 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01466 Lapu-Chr5 27843772 27846544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01466 6 338 Trihelix Transcription Factor Family AT3G14180 25.737 9.04e-20 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lapu5g01466 Myb_DNA-bind_4 8.6e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01466 - - gmx:100799917 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g01466 5 27843772 27846544 Lapu5g01466 5 27843772 27846544 ECH