Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01465 ATGGACACCAAGCTGTTAACAATCCGCACTCTCGTCTCCTCCCTCACTTCCTCCTCCGACCAAACCCGCCTCGCCGCCCTCCGCCACCTCCACCGCACCTCCAACGAGGACCCCGACGCCCGCCCCCTCATCTCCGCCGCCGGCGCCGTCCCCCTCCTCGCCGCTGCCCTCTACTCCTCCTCCCACCCCATCCAAGACCACGCCGCTGCCACCCTCCTCAACCTCTCCATATCCGACCGCGCCCCCCTCATCTCCTCTCCCTCCCTCTTACCCGCCCTCGCCCACCTCCTCTCCCACCACGCCACCTCCTCTGCCGCCGCCGCCGTCCAATCCGCCGCCGCCACCCTCCACAGCCTCCTCGCCGTGGTAGCCGAGTTTCGTCCCGCCGTGGTTGCAAAACCCGATATCCTTCGTGCCCTCATCAGCATAATCAGTCATCCTGATTCACTCACGAGGACGATAAAGGATGCTCTGAAAGCAACCTTTGGAATTGCACTCTACCCGCCGAGTCGACCTACACTGGTTCGGTTCGGCGCAGTTCCCGTGCTCTTCGCTGTGGTAGCGAAAGACAAGGATGGGAAGAGAAGAGTTGGCATAATTGAGGATGCCACTGCGGTGATCGCGCAAATTGCGGGGTGCGAGGAGAGCGAGGAGGCGTTTCTTAAGGTTTCGGGGGTTTCTAGGTTGGCGATGATGTTGTGTTCGGAAAGTGGAAGCTGTAGTTTGAGGACAAAGGAGAATGCTGTTGCGGCGCTGTTGAATTTGGTGAGATATGGGAGTGAGAGAGTGGTTGGGGAGGTTAGGAACAAGGTTGGGACGTTGGATGGGATCACGTACGTGCAGGAACACGGTAGCCCCAAAGGGAAGAGCAAAGCCGTGGCCTTTTTCAAGCTTTTGCTTGATGGTGGAAGCAGTGGTGAAATTGTTCAAGATTTGTACCCTGTTGACTCTGATTCGGGTTCAAGTTACAGGGGATAA 978 0.5849 MDTKLLTIRTLVSSLTSSSDQTRLAALRHLHRTSNEDPDARPLISAAGAVPLLAAALYSSSHPIQDHAAATLLNLSISDRAPLISSPSLLPALAHLLSHHATSSAAAAVQSAAATLHSLLAVVAEFRPAVVAKPDILRALISIISHPDSLTRTIKDALKATFGIALYPPSRPTLVRFGAVPVLFAVVAKDKDGKRRVGIIEDATAVIAQIAGCEESEEAFLKVSGVSRLAMMLCSESGSCSLRTKENAVAALLNLVRYGSERVVGEVRNKVGTLDGITYVQEHGSPKGKSKAVAFFKLLLDGGSSGEIVQDLYPVDSDSGSSYRG* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01465 325 SUPERFAMILY ARM repeat 7 309 IPR016024 -
Lapu5g01465 325 FunFam ARM repeat superfamily protein 2 304 - -
Lapu5g01465 325 PANTHER U BOX DOMAIN-CONTAINING 8 299 - -
Lapu5g01465 325 SMART arm_5 37 77 IPR000225 GO:0005515
Lapu5g01465 325 SMART arm_5 167 212 IPR000225 GO:0005515
Lapu5g01465 325 SMART arm_5 213 257 IPR000225 GO:0005515
Lapu5g01465 325 Gene3D - 6 298 IPR011989 -
Lapu5g01465 325 Pfam Armadillo/beta-catenin-like repeat 38 76 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01465 Lapu-Chr5 27837453 27838828 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01465 8 299 U-box Gene Family AT1G23030 26.621 4.52e-20 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01465 - - gmx:100803111 467.618