Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01457 ATGCTGCATTGCTTTGGTCCAATATATTCTGCAGTGTTGAATGCAGCACTTGAACTAAACTTGTTTGAGATCATAGCAAAGGCATCTCCATCATCACTTGGTGTCTCTGCATCTGATGTTGCATCTCAACTTCCAACGCAGCACCCAGAATTGCCACGAAGAGTTGATCGCATGCTGTCTCTACTTGCAAGTCACTCTCTTCTTACTTGTTCCACTCGCACGAGCCAAGATGGTCACCCTCAAAGGTTCTACCACCTATCTCTTGCTGGTCAATACTTCATCAAAGATCACAACAAAGGCTCTCTATCTTTCTTATCAACTTTTTTCACTCACCCTTCCATCGTTCATGTCTTGCTGAATTACAAAGAGGTACCTTTGGAGTTTGACAAGGACTTGTATGAGAAAGTTCATGGAGTGCCTCTTTATGAAGGCATGTACTCTGATCCTAAACTGAGTAATATTTTCAAAGAAACAATGACTCATCTTGGCACAATCGAGATGAAGAAGATACTAAACTTGTATAGAGGATTTGAAGAAATATCTTTGCTAGTTGATGTGGGTGGTGGCATAGGCCAAGATTTGAATATGATAATCTCCAAATATCCTTCTACAAATGGCATTAATTTTGATCTGCCTCATGTTATACAAAATGCTCCCATTTATTCAGGGATAAAGCAAGTTGAAGGAAACATGTTTGAAAGTGTTCCAAAAGGTGATGCTATAATATTGAAGGCTGTATTACACAATTGGTCCGATGAAAAATGTCTGCAAATTCTAAGTAATTGCTACAAAGCTTTGCCAGAAAAAGGGAAGGTAATTGTTGTGGATATCATAGTGCCTGAAGCAATTGAATCCACAGATGCAGATAAAATGGTTACTGGCTTTCACAACCTCATGTTTTTGGATGGTGGCACTGAAAGAACTGAGAAAGAATTTCAGAATTTATGCAAACTAGCAGGATTTTCTCATTTTGAAGTTGTTTGTCGTGTCTTCTCAGCTTTAGGAGTTATAGAATTTCATAAGTAG 1026 0.386 MLHCFGPIYSAVLNAALELNLFEIIAKASPSSLGVSASDVASQLPTQHPELPRRVDRMLSLLASHSLLTCSTRTSQDGHPQRFYHLSLAGQYFIKDHNKGSLSFLSTFFTHPSIVHVLLNYKEVPLEFDKDLYEKVHGVPLYEGMYSDPKLSNIFKETMTHLGTIEMKKILNLYRGFEEISLLVDVGGGIGQDLNMIISKYPSTNGINFDLPHVIQNAPIYSGIKQVEGNMFESVPKGDAIILKAVLHNWSDEKCLQILSNCYKALPEKGKVIVVDIIVPEAIESTDADKMVTGFHNLMFLDGGTERTEKEFQNLCKLAGFSHFEVVCRVFSALGVIEFHK* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01457 341 Pfam Dimerisation domain 12 63 IPR012967 GO:0046983
Lapu5g01457 341 Pfam O-methyltransferase domain 131 322 IPR001077 GO:0008171
Lapu5g01457 341 Gene3D Vaccinia Virus protein VP39 152 330 IPR029063 -
Lapu5g01457 341 SUPERFAMILY "Winged helix" DNA-binding domain 2 97 IPR036390 -
Lapu5g01457 341 PANTHER O-METHYLTRANSFERASE 10 324 IPR016461 GO:0008168
Lapu5g01457 341 FunFam Caffeic acid 3-O-methyltransferase 2 93 - -
Lapu5g01457 341 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 101 331 IPR029063 -
Lapu5g01457 341 Gene3D - 8 170 IPR036388 -
Lapu5g01457 341 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 341 IPR016461 GO:0008168
Lapu5g01457 341 PIRSF O-mtase 1 341 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01457 Lapu-Chr5 27764565 27767918 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01457 12 341 Monolignol Biosynthesis Gene Families AT5G54160 44.144 3.63e-90 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01457 - - gmx:100784030 453.751