Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01456 ATGGGTATGGCAGCAGAGGCACAGTTTCATGTTTTGGCGGTTGATGATAGTCTTATTGACAGAATGTTGATCGAGAGACTCCTCAAAACATCTTCCTTTCATGTTACTGCTGTGGATTCTGGTAGTAAGGCTTTGAGGTTTCTTGGTTTGGTTGAAGATGAGAAGAGAAATGAAGAACCTCCCACTATTGCTCTAGAAGCAGCCAATCAGGATGTAGAAGTAAACCTGATCATAACTGATTACTGTATGCCAGAAATGACAGGGTATGATCTGCTGAGAAAAATCAAGGAATCTAAATCTCTTAAAGACATACCAGTGGTGATTATGTCCTCAGAAAATGTCCCGTCAAGGATCAACAGATGCCTAGAAGATGGAGCCGATGAATTCTTTTTGAAACCAGTTCAACAGTCAGATGTAAACAGGCTAAGGCCTCATTTGATGAAATCAAAAGTTAAGGATGAAGAACAGCTACAAATGAATAACAAAAGGAAGGAAACAACAGAAGAAAGTGATTCCCCAGATAAAACTAGGACAAAAATGGAGCCTCAAAAAGTGGTTAATTCCAGTTAA 570 0.393 MGMAAEAQFHVLAVDDSLIDRMLIERLLKTSSFHVTAVDSGSKALRFLGLVEDEKRNEEPPTIALEAANQDVEVNLIITDYCMPEMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEDGADEFFLKPVQQSDVNRLRPHLMKSKVKDEEQLQMNNKRKETTEESDSPDKTRTKMEPQKVVNSS* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01456 189 MobiDBLite consensus disorder prediction 145 189 - -
Lapu5g01456 189 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 177 IPR045279 GO:0009736
Lapu5g01456 189 Gene3D - 10 186 - -
Lapu5g01456 189 ProSiteProfiles Response regulatory domain profile. 10 147 IPR001789 GO:0000160
Lapu5g01456 189 SUPERFAMILY CheY-like 9 143 IPR011006 -
Lapu5g01456 189 MobiDBLite consensus disorder prediction 145 181 - -
Lapu5g01456 189 CDD REC_typeA_ARR 11 142 - -
Lapu5g01456 189 SMART REC_2 9 146 IPR001789 GO:0000160
Lapu5g01456 189 Pfam Response regulator receiver domain 11 139 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01456 Lapu-Chr5 27752026 27753984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01456 1 162 Response Regulator Gene Family AT3G57040 64.634 2.47e-73 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu5g01456 Response_reg 8.1e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01456 K14492 - gmx:100818762 289.656