Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01455 ATGGAAGTCATTGCTCAGATAGTCTTACAAAACTTGAACTCTTTTGCTCAAGAGGAGTTTGGAATCATTTGGAATCTCAAAGATGACGTACAACAAATGAAGCTCACAGTATCTGCAATAAAAGCTGTACTCCTGGATGCAGAGGCAAAGACCAACAACCTTCAAATCAGTAATTGGTTGGAGGAGCTGAAAGATGTACTTTATGATGCAGATGACTTGCTCAATGATTTCTCCACTGGTGCGTTGGAAAGAAAAGTGATAGGTGGTAGCAGAATCTTGAGAGAGGTACAGATTTTCTTCTCCCAAAGAAACCAAATTGTCTATGGTTTTAAATTGGGTCATGAAATGAAAGCAATCCAGAAGAGGCTAGATGCTATTGCTAAAAACAAGATTACATTGCAATTGACTGACCTCCCTGTGGAGACTCCAATTGCATATAGGGAGCAGAGACAAACTTACTCTTTTGTGAGTGAAGATGATGTTATTGGGAGAGAGGAGGAAAAGAAACTTCTTAAAAGTTATTTGCTAGACACCAAAGTGAGTGTGATGGACAATGTGTCTGTAGTTCCCATAGTTGGGTTTGGAGGACTAGGCAAAACCACCCTTGCTCAACTTGTTTATAATGATAATACAGTCCAATGCTATTTTGATCAGAAAATGTGGGTGTGTGTCTCAGATGAATTTGACATAAGAAAAATAGCTGAAAAGATGGTTGGGAATGACAAAAATAGTGAGCTTGAGCAAGTACAGCATGGTCTCAGAAACAAAGTTCGAGGAAAAAGGTTTCTACTTGTGCTAGATGACGTGTGGAATGAGGATAGGGAGCTGTGGCTGAAATTGAAGAGCTTAGTTATGGAAGGAGGTAAAGGGAGTGCCATAATTGTAACAACACGTAGTAGGACCGCGGCGAAAATAATGGCCACACATCCACCCCTTTTCTTAAAAGGTCTTGATTTAGAAAGATCTTGGAAGCTATTCTCTCGAGTGGCGTTTGATGGGGGCAAAGAACCAAATGATTGTGAGTTGTTAGCCATGGGAAGGGATATTGTTCAAAAATGTGCTGGGGTTCCCCTTGCCATAAGAACTATTGGCAGCCTCTTGTACTCTCGAAACTTGGGCAGGAGTGATTGGCTATATTTTAGTGAAGTTGAGTTTTCAAAGATAGATCAACACAAGGACAAAATCTTTGCAATCCTTAAACTGAGTTATGATCATCTTCCTTCATTTTTGAAAAAATGTTTTTCTTATTGTTCATTGTTTCCAAAAGGTTTTGAGTTTGACAAGAAAACACTCATTCAGTTATGGGCGGCTGAGGGGTTCATTCAACCATCACGTGACAATAGATGTGAAGAAGATGTCGGTCACGAGTACTTCATGAATTTGCTGTCAATGTCACTTTTCCAAGATGTGACTTTGGATGATCGTGGTGAGATTATTACTTGTAAAATGCATGACCTGATCCATGATCTAGCACAGCTAGTGGTTGGGAAAGAATATGCGTTTCTTGAAAGAAAAAAAGAGAACATTGGAAACAGAACACGTTATTTGTCCTCGTGTACTTCATTACTTGTTTCAGAGAAAATATCATCCTCTTCCAACAAGTTAAGGACAGTTATTTTGCTTGGACAGCCACTTTATGGAAGTCAAAATGTGAGTCAGCCACGTCTTCATTTTCCTTTTCTTTTAAGCATAAAAAAGTGCTTACGGGTGTTAACACTCTGCGGGCTGGATATCATAACAATTCCAAATAGTATTCGAGAGTTGAAGCAATTGAGATATCTTGATCTTTCAATGAATAAGTTTCTGGTAAGTCTTCCACCAGATGTTACTAGCTTGCATAACTTGCAAACTTTAAAACTTTCTCAGTGCGGCGAACTTAAAGAATTACCCTCAGATATCAACAAAAGTCTTAGACATCTTGAATTGAATGATTGTGAGGAATTGACATGTATGCCATGTGGGTTGGGACAATTGACCAATCTTCAAACACTAACACATTTTCTATTGGACTGTAACAGTAAAAATGGTGATATAAGTGAATTGAGTGGGCTAAACAGCCTTAGAGGAAAATTAGTAATTCAATGGCTGGATTCCCTCCGAGAGAATGCTGCAGTGGTTGAGTCTGCAAAGACACTTATCGGGAAGCAACATCTTCAAGAACTGGAATTACGGTGGTGGCGGCTCCGTGAGGGGCAATTGTGGGACGATCCTATTGAACAAAGACGTATGATGGAAAAAGAAAACAGATGGTTGGAAAATGAAAAGATCTGGTTGAAAGATGAAAAAATGTTGGCTTCTAAAAATAAAATGAAGAAAGATGAAAAGATATTGCAAGGCCTGCAGCCTCATCATTCAATAAAAAAACTTGTAATAGATGGATATTGTGGTAAAAGTTTACCAGACTGGATAGGGAATCTCTCATCACTCTTGAGTCTTGAAATCAGTAATTGCAATGGTTTGACATCACTTCCTAATGGAATTCGGAACCTTGTGTCTTTACAACGACTCTGCATATATAACTGCTCACTGCTAGAAAGAAGATGTGCAAGAAGAAATGGTGAAGACTGGCCAAAAATCGCTCATATCCCAAAAGTTTCTGTCTCTCCCTTTGCACCAACTGTTCTCAGGTATATTAATTGA 2640 0.3894 MEVIAQIVLQNLNSFAQEEFGIIWNLKDDVQQMKLTVSAIKAVLLDAEAKTNNLQISNWLEELKDVLYDADDLLNDFSTGALERKVIGGSRILREVQIFFSQRNQIVYGFKLGHEMKAIQKRLDAIAKNKITLQLTDLPVETPIAYREQRQTYSFVSEDDVIGREEEKKLLKSYLLDTKVSVMDNVSVVPIVGFGGLGKTTLAQLVYNDNTVQCYFDQKMWVCVSDEFDIRKIAEKMVGNDKNSELEQVQHGLRNKVRGKRFLLVLDDVWNEDRELWLKLKSLVMEGGKGSAIIVTTRSRTAAKIMATHPPLFLKGLDLERSWKLFSRVAFDGGKEPNDCELLAMGRDIVQKCAGVPLAIRTIGSLLYSRNLGRSDWLYFSEVEFSKIDQHKDKIFAILKLSYDHLPSFLKKCFSYCSLFPKGFEFDKKTLIQLWAAEGFIQPSRDNRCEEDVGHEYFMNLLSMSLFQDVTLDDRGEIITCKMHDLIHDLAQLVVGKEYAFLERKKENIGNRTRYLSSCTSLLVSEKISSSSNKLRTVILLGQPLYGSQNVSQPRLHFPFLLSIKKCLRVLTLCGLDIITIPNSIRELKQLRYLDLSMNKFLVSLPPDVTSLHNLQTLKLSQCGELKELPSDINKSLRHLELNDCEELTCMPCGLGQLTNLQTLTHFLLDCNSKNGDISELSGLNSLRGKLVIQWLDSLRENAAVVESAKTLIGKQHLQELELRWWRLREGQLWDDPIEQRRMMEKENRWLENEKIWLKDEKMLASKNKMKKDEKILQGLQPHHSIKKLVIDGYCGKSLPDWIGNLSSLLSLEISNCNGLTSLPNGIRNLVSLQRLCIYNCSLLERRCARRNGEDWPKIAHIPKVSVSPFAPTVLRYIN* 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01455 879 Gene3D - 317 402 IPR042197 -
Lapu5g01455 879 Pfam NB-ARC domain 182 404 IPR002182 GO:0043531
Lapu5g01455 879 PRINTS Disease resistance protein signature 188 203 - -
Lapu5g01455 879 PRINTS Disease resistance protein signature 353 367 - -
Lapu5g01455 879 PRINTS Disease resistance protein signature 256 270 - -
Lapu5g01455 879 PRINTS Disease resistance protein signature 586 602 - -
Lapu5g01455 879 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 417 IPR027417 -
Lapu5g01455 879 FunFam Probable disease resistance protein At1g63360 403 493 - -
Lapu5g01455 879 SUPERFAMILY L domain-like 482 843 - -
Lapu5g01455 879 Pfam Rx N-terminal domain 6 93 IPR041118 -
Lapu5g01455 879 Gene3D - 146 310 IPR027417 -
Lapu5g01455 879 FunFam Probable disease resistance protein At1g61300 145 311 - -
Lapu5g01455 879 Gene3D - 403 493 IPR036388 -
Lapu5g01455 879 PANTHER DISEASE RESISTANCE PROTEIN RP 55 838 IPR044974 GO:0006952
Lapu5g01455 879 Gene3D - 5 128 - -
Lapu5g01455 879 Gene3D Ribonuclease Inhibitor 525 853 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01455 Lapu-Chr5 27739991 27743518 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01455 185 505 WRKY Transcription Factor Family AT5G45050 25.513 8.52e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01455 - - gmx:100781872 1292.72