Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01446 ATGCCGGATGTTCAAGCCCTTGTTAATGAATTTGTGAATCTGCTTAAGAAGCGTAAAATTGAAGGGTCTCAGGCCACAGCGAAGCAGACAGCAGAGTTTCTCCGGTCAGTGATTTCGCATCAGCGCGTGCCACACACAAACCAGGCCACATCCCTGATTAATGCCGTAAGGGCTGTGGGGGAGCAGATTATTGATGCTAATCCTATTGAGTTATCTGTGGGAAATATTGTGAGGCGTGTTCTTCACATTATAAGGGAGGAGGATCTTTCCCTTGTTACAGATGCTATGGCTGGTTTTGGGATATCTGCTGAAAGTGATGATGAAGATGATGTAGATCGAGATGATCATCCTGCGTTATCTGCCGCAGCTGTTGCAGCTGCTGCAAGAAGCACCTTGCGTCCACCATCATTGCAAACTCTTCTTGAGGATGTGACAGATTCAGCTGCCGTTCCTCCAACTTCTTCCTCGGCGGGTGACTCTGAAGGAAAAAGTAGATCTGTTGAAAAGGGTACAAGAGGTCGGAAGTTGAAGCATGATGTCATTGAAGCAGTCAATGAACTTATTCAAGACATAACCTCTTGCCATGAACAAATAGCAGAACAAGCAGTAGAGCATATTCATCAAAATGAGGTAATATTAACGCTAGGCAGTTCAAAAACAGTGTTCGAATTTCTTTGTGCTGCAAAAGAGAAAAAGAGATCATTTAAGGTCGTTGTTGCTGAAGGTGCCCCAAGGTATCGGGGACATCTCCTTGCAAAAGAATTGGCTGCTAGGGGCTTACAGACCACAGTGATTGCTGATTCCGCGAGTTTTGCTATGATTTCCAGAGTGAATATGGTTATAGTTGGCGCTCATGCTGTCATGGCTAATGGTGGAGTAATTGCCCCAATTGGGTTGCATATGGTTGCCCTTGCAGCTCGTAGGCATGCTGTTCCTTTTGTTGTACTTGCTGGGAGTCACAAGTTGTGCCCTTTGTATCCGCACAATCCTCATGTCTTACTGAATGAGTTGAGATCTCCATCCGAGCTACTAGACTTTGGAGAATTCTCAGATTTGATGGATTCTGCAACTGTTGTTGGTTCCCTTCATGTTGTTAATCCAGCATTTGATTATGTGCCACCAAACCTTGTTAGTCTCTTCATTACTGACACTGGAGGGCATAACCCGTCATATATGTACCGGCTCATAGCTGATTATTACTCTGCCGATGATTTGGAGGTGAAACAAAGACCCACTACAGGGAATTGA 1248 0.4487 MPDVQALVNEFVNLLKKRKIEGSQATAKQTAEFLRSVISHQRVPHTNQATSLINAVRAVGEQIIDANPIELSVGNIVRRVLHIIREEDLSLVTDAMAGFGISAESDDEDDVDRDDHPALSAAAVAAAARSTLRPPSLQTLLEDVTDSAAVPPTSSSAGDSEGKSRSVEKGTRGRKLKHDVIEAVNELIQDITSCHEQIAEQAVEHIHQNEVILTLGSSKTVFEFLCAAKEKKRSFKVVVAEGAPRYRGHLLAKELAARGLQTTVIADSASFAMISRVNMVIVGAHAVMANGGVIAPIGLHMVALAARRHAVPFVVLAGSHKLCPLYPHNPHVLLNELRSPSELLDFGEFSDLMDSATVVGSLHVVNPAFDYVPPNLVSLFITDTGGHNPSYMYRLIADYYSADDLEVKQRPTTGN* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01446 415 Pfam Initiation factor 2 subunit family 19 389 IPR000649 GO:0044237
Lapu5g01446 415 Gene3D - 194 399 IPR042529 -
Lapu5g01446 415 SUPERFAMILY NagB/RpiA/CoA transferase-like 7 404 IPR037171 -
Lapu5g01446 415 MobiDBLite consensus disorder prediction 145 175 - -
Lapu5g01446 415 FunFam translation initiation factor eIF-2B subunit beta 194 400 - -
Lapu5g01446 415 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 2 406 - -
Lapu5g01446 415 MobiDBLite consensus disorder prediction 145 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01446 Lapu-Chr5 27641924 27648378 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01446 1 405 Eukaryotic Initiation Factors Gene Family AT3G07300 78.624 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01446 K03754 - gmx:100807877 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g01446 5 27641924 27648378 Lapu5g01446 5 27641924 27648378 ECH