Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01430 ATGGAGAGCCAACAAATTCTCATGCTAATGATTTACACTACTTTCTTTTGCTTCATGCTCACTTTGTCTGATCAATCTACAGTTTCTATTACCTCAAATCAGTCCATACAATATAATGAGACCCTTGTTTCTTCAGAAGGTACCTTTGAAGCAGGATTTTTCGACTTTGGAAACTCAAGAAGTAGATATTTTGGTATATGGTACAAGAGCATATCACCAAGGACTATTGTGTGGGTTGCCAACAGGAATGCCCCAGTACAAAACTCAGCAGCAGTTCTGGAACTTACTCATCAAGGAAATATTGTGATTCTTGATGGCTCCAGAGGTAGAGTGTGGTCCTCCAACTCATCCAGAATTGCAGTGAAACCAGTTGTGCAGCTTTTAGATTCAGGAAATCTTGTTGTGAAAGATGGTGAGAGCTCAGAGAGCATCTTGTGGCAAAGCTTTGACTACCCTGGAGACACTTTCCTTGCAGGAATGAAACTGAAAAGCTATTTTGTTACTGGGCCATATCAGTATCTCACATCTTGGAGGGACTATGAAGATCCAGCTGAAGGTGAGTTTTCTTATAGGATCGATACAAAGGGCTTTCCTCAACAAGTTACTACAAATGGAACAACAATTTTGTACAGCACAGGCCCTTGGAACGGCTATCTTTTCAGTGGAGTTTCTTGGGACAGAATGCACAGATTCTTGAATTTCTCTCTAGAGTTCACTAACAAAGGAGTTTCTTATGGATATGAAACGTTAAACAGTTCAGTGCTTACTACAACCATGCTTAAGCTCAATCCAAGAGGGGGTACAGAGCGTTCTCTATGGTCAAACCAACGACAAAGATGGGATATTGTAAACACTCATCCAGCAGACCAGTGTGAATATTTTGCAGCTTGTGATGTCAACTCTATCTGCAATAATAATAATGTTCCAATATGTGAATGCTTGCAAGGTTTCACACCAATGTTTCAAGCAAAGTGGGATTCTCATGATTGGTCTGGTGGTTGTGTCAGAAGAACAAAATTAAATTGTGATAATGGAGATGGGTTCAAGAAGTACACAGGAATAAAGTTGCCAGAAACGTCTTCTTCCTGGTTTGACAGGAGCTTGAGCCTTGAGGAATGTGAGACATTGTGTTTGAGAAACTGCTCTTGTACTGCATATGCAAATTCAGATATTAGAGATGGTGGGAGTGGTTGCTTGCTTTGGTTTCATGACATTGTGGACATGAGAACTCACACTGATCGAGGACAAGAAATTCATATACGACTTCCATTCTCTGAACTTGATCAAAGAAGGAATAAGAGGGACCTAAATCGAAAGAGGCTTGCATGGATTCTAGTAGGACTTGTTACATTCATAACAGGACTAACAATTCTTGTGTGGGCAACTTCAACAGGCATAAAAGGGATGAAGCTACCCAGGTCAGTGAAAAAAGTAGTTCTCTGGAAGCACATGATCGAGAAGGAAGACGACAGCTTACCAACAGTATTTGATTTTTCAACCATTGATATTGCCACAGATAATTTTTCTAACAGAAACAAGTTAGGAGAAGGTGGTTTTGGAACAGTATACAAGGGCATGTTGATAGATGGACAAGAGATTGCAGTTAAGAGACTTTCAAAAACTTCGAAACAGGGAACTGAGGAGTTCAAAAATGAAGTAAAGTTCATGGCAAGACTTCAGCACCGTAATCTTGCAAAACTTCTTGGTTGTTCTATTCAACAAGATGAGAAGCTGTTGATCTATGAATTCATGCCCAACAGAAGCTTGGATTACTTTATTTTTGATACAAGGCGAGGCAAATTACTAGATTGGACTAAGCGCTTGGAAATTATCGAAGGAATTGCTCGAGGTCTAATGTATCTTCATCAAGATTCTAGACTTAGAATAATACATAGAGATATCAAAGCAAGTAACATTCTTCTTGATAACAATATGATTCCAAAGATATCAGATTTTGGATTAGCAAGAACATTTGGAGGAGATCAAGCTGAAGCAAATACAAACAGAGTGATGGGAACATATGGCTATATGTCTCCAGAATATGCAGTGCATGGTTCTTTCTCAACCAAATCTGATGTTTTCAGTTTTGGTGTAATTGTTATTGAGATAATTAGTGGGAGGAAGAATCGTGGATTTCGTGACCCTCACCATCATCTTCTCAACCTTCTAGGTCATGCGTGGAGATTGTGGATTGAAGAAAGGCCATTGGAGTTAATGGATGACATATTAGATGATGATAGAGCATTATCTTTAGAAATATTACGGTGTGTTCATGTGGGTCTGTTGTGTGTACAACAGAATCCAGAAAATAGGCCTAACATGTCATCTGTTGTTTTGATGTTAAATGGCGAAAAGTTACTTCCAAAACCAAGCCAACCTGGATTCTATACAGGAAAAGATAATATAGCTGACACGGAATCTTCAAAGCATTATGAAAGGTGTTCAGTAAATGAAGTTTCAATTTCATCCTTAGAAGCGCGATAG 2484 0.3905 MESQQILMLMIYTTFFCFMLTLSDQSTVSITSNQSIQYNETLVSSEGTFEAGFFDFGNSRSRYFGIWYKSISPRTIVWVANRNAPVQNSAAVLELTHQGNIVILDGSRGRVWSSNSSRIAVKPVVQLLDSGNLVVKDGESSESILWQSFDYPGDTFLAGMKLKSYFVTGPYQYLTSWRDYEDPAEGEFSYRIDTKGFPQQVTTNGTTILYSTGPWNGYLFSGVSWDRMHRFLNFSLEFTNKGVSYGYETLNSSVLTTTMLKLNPRGGTERSLWSNQRQRWDIVNTHPADQCEYFAACDVNSICNNNNVPICECLQGFTPMFQAKWDSHDWSGGCVRRTKLNCDNGDGFKKYTGIKLPETSSSWFDRSLSLEECETLCLRNCSCTAYANSDIRDGGSGCLLWFHDIVDMRTHTDRGQEIHIRLPFSELDQRRNKRDLNRKRLAWILVGLVTFITGLTILVWATSTGIKGMKLPRSVKKVVLWKHMIEKEDDSLPTVFDFSTIDIATDNFSNRNKLGEGGFGTVYKGMLIDGQEIAVKRLSKTSKQGTEEFKNEVKFMARLQHRNLAKLLGCSIQQDEKLLIYEFMPNRSLDYFIFDTRRGKLLDWTKRLEIIEGIARGLMYLHQDSRLRIIHRDIKASNILLDNNMIPKISDFGLARTFGGDQAEANTNRVMGTYGYMSPEYAVHGSFSTKSDVFSFGVIVIEIISGRKNRGFRDPHHHLLNLLGHAWRLWIEERPLELMDDILDDDRALSLEILRCVHVGLLCVQQNPENRPNMSSVVLMLNGEKLLPKPSQPGFYTGKDNIADTESSKHYERCSVNEVSISSLEAR* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01430 827 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 772 - -
Lapu5g01430 827 PIRSF SRK 1 827 IPR024171 GO:0004674
Lapu5g01430 827 Pfam S-locus glycoprotein domain 210 320 IPR000858 GO:0048544
Lapu5g01430 827 Gene3D Hepatocyte Growth Factor 339 421 - -
Lapu5g01430 827 Gene3D - 21 149 IPR036426 -
Lapu5g01430 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 584 789 - -
Lapu5g01430 827 ProSiteProfiles Bulb-type lectin domain profile. 27 148 IPR001480 -
Lapu5g01430 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Lapu5g01430 827 ProSitePatterns Protein kinases ATP-binding region signature. 514 536 IPR017441 GO:0005524
Lapu5g01430 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 341 422 - -
Lapu5g01430 827 Pfam PAN-like domain 342 408 IPR003609 -
Lapu5g01430 827 CDD B_lectin 39 152 IPR001480 -
Lapu5g01430 827 Pfam Protein tyrosine and serine/threonine kinase 511 778 IPR001245 GO:0004672|GO:0006468
Lapu5g01430 827 SMART ntp_6 343 422 IPR003609 -
Lapu5g01430 827 CDD STKc_IRAK 514 783 - -
Lapu5g01430 827 Gene3D Transferase(Phosphotransferase) domain 1 584 788 - -
Lapu5g01430 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 473 583 - -
Lapu5g01430 827 ProSiteProfiles Protein kinase domain profile. 508 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01430 827 CDD PAN_AP_plant 338 423 - -
Lapu5g01430 827 Pfam D-mannose binding lectin 75 178 IPR001480 -
Lapu5g01430 827 SMART serkin_6 508 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01430 827 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 217 IPR036426 -
Lapu5g01430 827 SMART blect_4 33 152 IPR001480 -
Lapu5g01430 827 SUPERFAMILY Protein kinase-like (PK-like) 491 781 IPR011009 -
Lapu5g01430 827 Pfam Domain of unknown function (DUF3403) 787 827 IPR021820 GO:0004674
Lapu5g01430 827 Gene3D Phosphorylase Kinase; domain 1 482 583 - -
Lapu5g01430 827 ProSiteProfiles PAN/Apple domain profile. 342 423 IPR003609 -
Lapu5g01430 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01430 Lapu-Chr5 27490056 27493985 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01430 496 795 Receptor kinase-like Gene Family AT4G05200 57.807 4.19e-122 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu5g01430 PK_Tyr_Ser-Thr 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01430 - - gmx:100819820 1293.49