Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01424 ATGGTTCAAAGAAAGGTGCCTAGCAAGCTTGGTATCCAAGCTGAACATGTTAAATCAGACAAGAGGTTGGCAAACATGAAGCTATCTTCATCTCAGCACCAAGATGGCAAAAGTAGAGGGGCTGACATGAAGAAGAAAATGAGAAAATCAAGGTCAATAAAGCTTTCTGATCTCGAGGCTCTTCAATCATCATCACCTTCAAGGAGAAGCTTGTCCCAACCGGGAAAGCCACCCCCTCTTCATACTCCAACAACTACAGCATCAGCATCACCGCAGAAGCAGCAACCTTTGTTCAGAACAACAGATGGTTCACCCAATTACATGAAGCCAACAAGCAGTTCGCATGCAAAAAAGGAACTTTTCCCGGTAAGCCACAGGAACACTCAATCTGGTTCTGATTTTAAGAATCTTCCAAGGAAATTTTCCACTGATTCCAAAACTGCCTGTGCTAAAAAACCTGCCAAAGCCTTGACAAGAACGTCAAGTTTGAGTTTGGTGAGAACATTGACAAAAACCACTAGTTTCAAGGCTTCTAGAGCCTGTTCTAGAAAATCCTCCAGGGCTGTTATGTGTGCAGATATGACTGCACCACAGAAAGCCACTTGTTCTTCAACTCTGAAGGACTCAAAGTTCCCTTCGTACCTCATGCTTAGTCCTGGGGGAACTGAGTCAGAGGGAACTTCAGCCATGAAGGTTTGCCCTTACACCTATTGTTCCCTTAATGGTCATCATCATGTTGATTTGCCACCATTGAAGAGCTTCATGTCAGCGAGGAGGCGCCTTCTGAAGACGCAAAAGCGCGCCAAGCTTGAAGCTCTCAGCCCTCGGAGACTGAAGGTTCCCCTTGAGACAGATAAGAAGGACTCTGATGTTGAGCAGAGTGTTTTTGAGGAAAAACCTGCTTGTGATGAAATTGGCATTGATATCTTCATTGAAATCTATGCCAACACAAAGGATACAAAACCAACCGGAGCAGAGGAAATGGGGAGAATAGATTTTCTCAAGGAGATTGAGGATCAAGCAGATAACGAGTCCTCGATTGAAGATAATGGCATAGCAGAAAGTGAGGAGGGTGTCATGCAAGTCATTACTCCAAGAATGATTGGTATTCCTTCTCCCTCTGTATGTGAAATTGATCTTGAGGAGGATTTGAAAAAATCCTTTGATGAAGTTGCAATTGAAGTAGACACCAACGGGAACTTTCTCCAAGAACTAAATTCACATGCAGATGAAGATCACCAGCCTACTCTCTGGTCTCATGAAGAAATGAGTATGGGAAGCTACTGCGGTGATGGGGAACAATACATGGGGGATGTTGACATGGATGATTCTGATTCCAGAACCTATGAGATGGAGTGGAAGGAGGAGCGATTTTGCGGATTCGATCATGAAGAGGATGCTGTTTCTTCTGTTTACACAGAAGAGGACAACGACTCAAAAGTTGAGTCCTCATCAGAGAGTTCTCATGATGTGTCAGTGACATGGTTAGATGATATCATTGGTAGCTATTATGAGGACTTTCTGGTTGAAGAAACACACAAAGAAGCCAATTCAAAGGAAAGCACTCATTTTGAAGAACCTAGTAGCATTAGTTCTGTCCTTGAAGACACAAATGGAAGCATTGAAACTAAAGAAATTGAGTACTCCTCCACAGGTACGGTTTGTGATCAATCTTCATTCACGGAGGAAATATTTGAGTATATGACAAATGCGCAAGATAAGAGTGGACAAGATGAGAAGCATGTAGATGATGAGGCCAGTTGCAACACAAAGAATCTTGATGAAGAGACCATTAACAACACTCAGTGTCAGAAGATGAGTGAAACTAGCACAATTGACGAGACAAGTGAAGATGGATACTCAAGCAGCCTAGAGAACAATGAAGAGAGCAATAAAAGGGAGAGCCAAATTGAGTTGGTGGATGTGTCTGAGGAAAGTAATATGGCTGATCAAGATCAGGATTTGTTGGAGAGAGACCAAGGCAAAGATGGAAGGATCCAAAGCACAAGTTGCATAGGTGAAGAGGAAAGCACAAGCATGAATTGGAAAGATGCAGTTAGGAGAAAGAGGGGTGTTGAAGATGATGATGAGATGAGAAAGTTCAACCCCAAAGAGCCAAATTTCCTGCCATTGGTTCCTGATCCGGAACAAGAAAAGGTTGACCTGAGGCATCAAATGATGGATGAGAGGAAGAATTCAGAGGAATGGATGCTTGATTGTGCACTCAGACAAGCTGTGACAAAACTTGCACCAGCTAGGAAGAAGAAGGTGGCACTGCTAGTTGAAGCCTTTGAAACGGTGATGCCAGCACCCAAATGTGAAAACCGTGTGAGAAACAATTCAGCATTTGGTCATGCAGGAAGAACTCAAGCTTGTAGCTGA 2382 0.4328 MVQRKVPSKLGIQAEHVKSDKRLANMKLSSSQHQDGKSRGADMKKKMRKSRSIKLSDLEALQSSSPSRRSLSQPGKPPPLHTPTTTASASPQKQQPLFRTTDGSPNYMKPTSSSHAKKELFPVSHRNTQSGSDFKNLPRKFSTDSKTACAKKPAKALTRTSSLSLVRTLTKTTSFKASRACSRKSSRAVMCADMTAPQKATCSSTLKDSKFPSYLMLSPGGTESEGTSAMKVCPYTYCSLNGHHHVDLPPLKSFMSARRRLLKTQKRAKLEALSPRRLKVPLETDKKDSDVEQSVFEEKPACDEIGIDIFIEIYANTKDTKPTGAEEMGRIDFLKEIEDQADNESSIEDNGIAESEEGVMQVITPRMIGIPSPSVCEIDLEEDLKKSFDEVAIEVDTNGNFLQELNSHADEDHQPTLWSHEEMSMGSYCGDGEQYMGDVDMDDSDSRTYEMEWKEERFCGFDHEEDAVSSVYTEEDNDSKVESSSESSHDVSVTWLDDIIGSYYEDFLVEETHKEANSKESTHFEEPSSISSVLEDTNGSIETKEIEYSSTGTVCDQSSFTEEIFEYMTNAQDKSGQDEKHVDDEASCNTKNLDEETINNTQCQKMSETSTIDETSEDGYSSSLENNEESNKRESQIELVDVSEESNMADQDQDLLERDQGKDGRIQSTSCIGEEESTSMNWKDAVRRKRGVEDDDEMRKFNPKEPNFLPLVPDPEQEKVDLRHQMMDERKNSEEWMLDCALRQAVTKLAPARKKKVALLVEAFETVMPAPKCENRVRNNSAFGHAGRTQACS* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01424 793 Pfam Plant calmodulin-binding domain 679 769 IPR012417 GO:0005516
Lapu5g01424 793 MobiDBLite consensus disorder prediction 691 713 - -
Lapu5g01424 793 MobiDBLite consensus disorder prediction 56 71 - -
Lapu5g01424 793 MobiDBLite consensus disorder prediction 592 626 - -
Lapu5g01424 793 MobiDBLite consensus disorder prediction 82 113 - -
Lapu5g01424 793 MobiDBLite consensus disorder prediction 123 143 - -
Lapu5g01424 793 MobiDBLite consensus disorder prediction 573 591 - -
Lapu5g01424 793 MobiDBLite consensus disorder prediction 572 666 - -
Lapu5g01424 793 SMART CaM_binding_2 658 769 IPR012417 GO:0005516
Lapu5g01424 793 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 769 IPR044681 GO:0005516
Lapu5g01424 793 MobiDBLite consensus disorder prediction 1 153 - -
Lapu5g01424 793 MobiDBLite consensus disorder prediction 523 538 - -
Lapu5g01424 793 MobiDBLite consensus disorder prediction 514 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01424 Lapu-Chr5 27435117 27438946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01424 637 793 Calmodulin-binding Proteins AT2G38800 41.765 1.00e-30 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01424 - - gmx:102660315 1228