Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01416 ATGAGGGAGCTGAGATGGGACTCCCAGGGATTAAATCCAATAAGCCTTCTTATTGACTGTGCCAAATGTGTTGCATCTGGAAGCATTAAGAATGCAGATATTGGCCTTGAGTACATATCTCAGATTTCATCTCCTGATGGTAATGCAGTGCAAAGGATGGTGAGTTATTTCAGTGAAGCACTTGGAAACAGAATAATAAAACATTTGCCAGGTGTATACAAATCTATCAATCCCCCAAAAACATCACTATCTTCAGAAGATATCCTTGTTCAGAAATACTTCTATGAATTGTGTCCCTTTTTGAAGTTCTCATACCTGATCACAAACCAAGCCATTGTAGAGGCAATGGAATGTGAAAAGGTGGTTCACATTATTGATCTCCATTGTTGTGAGCCAGCTCAATGGATAGATCTTCTACTCACTTTTAAAAACCGTAGGGGAGGTCCACCCCATCTGAAGATTACGGGCATTAATGAACAGAAACAAGTTTTAGACCAAATGAACTTTCATTTGACATCTGAAGCTGGGAATTTGGATTTTCCTTTGCAGTTCTATCCAGTTGTTAGCAAAGTGGAAGATGTTGACTTTGAGAAGTTGCCTGTTAAGACAGGAGATGCTATTGCAATAACTTCTGTTCTTCAGCTACATTCGCTTCTTTCTACTGATGATGACATGGCTGGAAGAATCTCCCCAGCCGCGGCAGCATCCATGAATCTGCAGAGAGCAGTGCATATGGGTCAAAGAACTTTTGCAGAGTGGCTTGAGAGAGATATGATCAATGCATATATCTTGAGTCCTGATTCTGCATTGTCACCTCTTTCCTTGGGTGCCTCGCCTAAGATGGGGATTTTTCTCAATGCCATGCGAAAACTCCAACCAAAACTGGTAGTGGTTACTGAACAAGAATCAAATCTGAATGGGTCCAATTTGATGGAGAGAGTTGATAGAGCATTGTACTTTTATAGTGCATTGTTTGACTGCTTGGACTCTACTGTAACAAGAACATCAGTTGAGAGGCAAAAGCTTGAGAGGATGCTTCTTGGAGAGCAGATAAAAAATATCATTGCTTGTGAGGGAGTTGATAGAAAGGAAAGACATGAGAAACTCGAAAAATGGATTAGAAGGCTTGAAATGGCTGGTTTTGTAAAGGTACCTTTGAGCTACAATGGGAGGATAGAAGCAAAGAATCTGTTGCAGAGATATAGTAATAAGTACAAATTTAGAGAAGAGAATGATTGTTTGCTTGTCTGCTGGAGCGATAGACCATTGTTTTCTGTATCAGCTTGGAGTTTTAGGAGATGA 1302 0.4025 MRELRWDSQGLNPISLLIDCAKCVASGSIKNADIGLEYISQISSPDGNAVQRMVSYFSEALGNRIIKHLPGVYKSINPPKTSLSSEDILVQKYFYELCPFLKFSYLITNQAIVEAMECEKVVHIIDLHCCEPAQWIDLLLTFKNRRGGPPHLKITGINEQKQVLDQMNFHLTSEAGNLDFPLQFYPVVSKVEDVDFEKLPVKTGDAIAITSVLQLHSLLSTDDDMAGRISPAAAASMNLQRAVHMGQRTFAEWLERDMINAYILSPDSALSPLSLGASPKMGIFLNAMRKLQPKLVVVTEQESNLNGSNLMERVDRALYFYSALFDCLDSTVTRTSVERQKLERMLLGEQIKNIIACEGVDRKERHEKLEKWIRRLEMAGFVKVPLSYNGRIEAKNLLQRYSNKYKFREENDCLLVCWSDRPLFSVSAWSFRR* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01416 433 ProSiteProfiles GRAS family profile. 4 430 IPR005202 -
Lapu5g01416 433 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 12 426 IPR005202 -
Lapu5g01416 433 Pfam GRAS domain family 14 429 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01416 Lapu-Chr5 27395440 27400832 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01416 1 433 GRAS Transcription Factor Family AT1G50420 50.340 9.09e-152 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu5g01416 GRAS 9.8e-119 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01416 - - gmx:106798410 806.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g01416 5 27395440 27400832 Lapu5g01416 5 27395440 27400832 ECH