Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01415 ATGAATGGGGAGGATAGGGGTAAATACCTGGCCCGTATCCTTAATGCCTGTGCCAAGTTTATTGAATCAGGAAGCATCCTGAATGCAGATACTGGACTGGACTATATTGCTCACATTGCCTCCCCTTATGGTGATGCAATGCAAAGGGTAGCCACCTATATTAGTGAGGGTCTAGCTTGCCAAGTCCTGAAAAATTTGCAGGGAGTACCTAAAGCTGTCAACTTGTCAAAAACAATGTCAACCTCGGAAGAACAACTTGTTAAGAAGACATTCTATGACCTGTATCCATTTTTAAAGACTGCATATGTAATCACAAGTCATGCCATTGCTGAAGCTATTGAAGGAGAAGAAGAGATCCACGTCATTGATCTCAGTGCATCTGATGCAGCTCAGTGGATTTATCTTATGCAGAGATTAAAAGAAAGCCAAAAGAATCCCCCATGTCTGAAAATCACAGGCATACACGAGAAGAAAGGAATTCTAGAGGAAGTGGACACTCAATTAAGAGTAGAAGCTAAAAATTTGCATTTCAATCTCAAATTCAATGCTATTGAAAGCACTTTGGAGAATCTTGACCTTGAAGAATTGCCTGTGAAGAAAGGAGAGCCTCTTGTAATCAGTTCAGTGCTTCAGCTGCACACTCTTCTGGCCACTGATGATGCAATGGTCTGCATCAGGAGCTCGCAGGAAGAACCAATGCATCAAAGGACATTTGCTGAGATGCTTGGGAAACAAAAGACCAACCCCAGTTCTGAGTCATTATTGTTACAACTTCCTCTGTGTGCTACTTCAACCAAGATGATGCACTTTCTGAATGGCCTTTGGAAACTCCAACCTAGAGTGTTGGTGATTACCGAACAAGAATCTAATGTCAACGGTTCTTTGACAGAAAGGGTTGACAAAGCATTGGACTTTTACGGTGCATTGTTCAACTGTTTGGAATCAACTGTTTCAACAACACTAGTAGAGAGAATCATCATGGAGAGGTTTCTACTGGGGCAAGAAATAAAGAACATTGTTGCATGTGAAGGAGTTGAGAGAAAGGAGAGACATGAGAAACTTGAGACTTGGATCCCAAGGCTAGAAATGGCCGGATTTGGGAAGAGACATATTAGCCATCATGGGATGATGCAAGCAACAAAACAGTTGCATGGTTATGGAAATGGATACAAGCTTTGTCCGGAGAATAATTGTTTGTTTGTATGCTGGAATGATAAGCCACTCTTTTCTGTGTCAGCTTGGACAGCTTAG 1251 0.4181 MNGEDRGKYLARILNACAKFIESGSILNADTGLDYIAHIASPYGDAMQRVATYISEGLACQVLKNLQGVPKAVNLSKTMSTSEEQLVKKTFYDLYPFLKTAYVITSHAIAEAIEGEEEIHVIDLSASDAAQWIYLMQRLKESQKNPPCLKITGIHEKKGILEEVDTQLRVEAKNLHFNLKFNAIESTLENLDLEELPVKKGEPLVISSVLQLHTLLATDDAMVCIRSSQEEPMHQRTFAEMLGKQKTNPSSESLLLQLPLCATSTKMMHFLNGLWKLQPRVLVITEQESNVNGSLTERVDKALDFYGALFNCLESTVSTTLVERIIMERFLLGQEIKNIVACEGVERKERHEKLETWIPRLEMAGFGKRHISHHGMMQATKQLHGYGNGYKLCPENNCLFVCWNDKPLFSVSAWTA* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01415 416 ProSiteProfiles GRAS family profile. 1 415 IPR005202 -
Lapu5g01415 416 Pfam GRAS domain family 11 415 IPR005202 -
Lapu5g01415 416 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 12 411 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01415 Lapu-Chr5 27395440 27400832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01415 4 414 GRAS Transcription Factor Family AT1G50420 43.880 1.06e-122 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu5g01415 GRAS 3.6e-101 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01415 - - vra:106778126 429.483