Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01408 ATGAGACAAACCTGTTTTCAGAAGGAAAAAAGAAAGGTTTGGATATTTGGGAGGGTTAAGAACAAGAAATTGCCTTCAATTACAGCTCCACCACCCTCAAAAGAAACAAGACTAAGTGAAGCTGAAGAAGAACACAGCAAGCATGCTTTAACTGTGGCCATTGCTTCAGCTGCTGCTGCTGAAGCTGCTATTACTGCTGCTCAGGTTGCTGTTGAGGTTGTCAGGCTCCAATCAGCTCACCAACAACTCAATGAAAAACAAGAACAGCTTCAACCTGTTAAAACTAGGCATGATGCTCCTCATTCCACACACCACTGCCAGAGGAAGATGGAAGAATCTTCAGCCATCAAAATTCAAACAGCATTTAGAGGTTACCTATCAAGGAAAGCTTTGAGAGCATTGAAGGGAATAGTGAAGCTTCAAGCTATCATTCGTGGAAGAGCTGTGAGACGCCAAGCTCTGTGCACTCTGAAGTGCTTGGAGTCCATAGTGAGTATCCAGTCACAGGTCTTTGCAAGGAGACTCCAAATGGTTGAAGGAAGATGGGGTTGTGGTGAACATGAAGATATAGAAGGTTCAAGAGACAAGATAATAAGGATGGACTCAAACAGCGAGAGAAGGTGGGATGACAGCATTTTGTTGAAGGAAGAGGTAGATGCCTCTTGCATGAGCAAAAAAGCAGTTGTTAAGAGAGAAAGAGTAAAAGAATACTCATTTAACCACAGAAAATCAGCTGAATCAGAAAGAAATAAAATAAATGGAAGATGGAGGTACTGGATGGAGCAATGGGTAGACACACAACTTTCCAAGAGTAAAGAACTTGAAGATTTAGGCTCAGTTTTCAGCTCACATTACTCTAGACCTGGTGAGGAAAGTGGAAGGAGACAACTAAAGCTCAGGAATATTCAGGGACAAAATCAGGTTGAAGGATTAGATTCTCCAGCCCTTTCTTCAAGGAACACATTTCCACACAGGAACCAGAATTCAGAGGCAGAAGATCACTCATTCCCAAGCTCACCTGCAATTCCTACATATATGGCTGCAACAAAATCAACACAAGCAAAAGCAAGATCAACAAGCTCCCCAAGAGCTAGGACAGGAGGGAATTTTGACATGAACTCTGATAGCTATTCACCATGCAAGAAAAAGTTACCTATTGTGACTTCTATTAACAGTGAAGTGCTTAGTAATGGTAGGATGGGAAAGCTAAGTAGCTATCAGCAAAGATCTCCTAGCTTAAAGGGCCTTCCTAGACATCTGAAACTAAGTCAGACATTGAGGGATCTCAGCATTAACTCAGATTGCTCAGCGCCAATTTAA 1320 0.4212 MRQTCFQKEKRKVWIFGRVKNKKLPSITAPPPSKETRLSEAEEEHSKHALTVAIASAAAAEAAITAAQVAVEVVRLQSAHQQLNEKQEQLQPVKTRHDAPHSTHHCQRKMEESSAIKIQTAFRGYLSRKALRALKGIVKLQAIIRGRAVRRQALCTLKCLESIVSIQSQVFARRLQMVEGRWGCGEHEDIEGSRDKIIRMDSNSERRWDDSILLKEEVDASCMSKKAVVKRERVKEYSFNHRKSAESERNKINGRWRYWMEQWVDTQLSKSKELEDLGSVFSSHYSRPGEESGRRQLKLRNIQGQNQVEGLDSPALSSRNTFPHRNQNSEAEDHSFPSSPAIPTYMAATKSTQAKARSTSSPRARTGGNFDMNSDSYSPCKKKLPIVTSINSEVLSNGRMGKLSSYQQRSPSLKGLPRHLKLSQTLRDLSINSDCSAPI* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01408 439 Gene3D - 110 161 - -
Lapu5g01408 439 ProSiteProfiles IQ motif profile. 135 162 IPR000048 GO:0005515
Lapu5g01408 439 Pfam IQ calmodulin-binding motif 113 132 IPR000048 GO:0005515
Lapu5g01408 439 MobiDBLite consensus disorder prediction 304 325 - -
Lapu5g01408 439 MobiDBLite consensus disorder prediction 85 110 - -
Lapu5g01408 439 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Lapu5g01408 439 SMART iq_5 110 132 IPR000048 GO:0005515
Lapu5g01408 439 MobiDBLite consensus disorder prediction 342 376 - -
Lapu5g01408 439 MobiDBLite consensus disorder prediction 304 376 - -
Lapu5g01408 439 Pfam Protein of unknown function (DUF4005) 328 407 IPR025064 -
Lapu5g01408 439 MobiDBLite consensus disorder prediction 90 110 - -
Lapu5g01408 439 MobiDBLite consensus disorder prediction 24 43 - -
Lapu5g01408 439 PANTHER IQ-DOMAIN 5-RELATED 10 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01408 Lapu-Chr5 27323119 27326170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01408 7 416 IQD Protein Family AT5G13460 44.084 6.06e-95 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01408 - - gmx:100794802 706.827