Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01404 ATGCTCATCCATTTCCATGGGCTACTACCACGTACCAACCTAAGAGTTACATATAAAAGAAAAAACCATCATGCTTCTGGTGCCACCAAGGGCCAGAAAGAAAACATGGATGATGGAAATGCTGAGCTTTCTGATAAGCTTTCAAATAATGTTCTATTTTTGAATCCAGAGTCATCTAGCAGTTTTCAAGCTTCAACATCCGTGAACACAGTTCCTGAATTATGTAGGAGTAGCAGCAGAACATGCACCCACACTCACACTTGCAACCCACCTGGCCCTGATGCTGCTCACACACACACATGCTATCACACGCACACCCAAATTTTTTCACCTGAAGATGATGACGACAAAGAGCACACCAAATCCAAACCAAAAAGGCCTTCTGGCAACCGAGAAGCAGTTAGGAAGTATAGGGAGAAGAAGAAGGCACACACAGCATACTTGGAGGAGGAAGTTAAGAAATTGCGTATGATTAATCAGCAACTAGCAAGGAAACTACAAGGGCAGGCACTTCTTGAAGCAGAACTGGCTAGGTTGAGGAGCATTTTGGCACACCTTAAGGGGAAAATAGACAGTGAATTGGGTGCTTTCCCCTTTCAAAAGCAGTGTAACTCTTCTTACATTTTCAAAGAAGGGGATGCTGGTTTTCTGTCCACTGCAAGCACAATTGGCCTTCAGTGTCAGAACAACTTGCCATGCTTCCTTCCACATGCAGGATCATCATCCCAGGTCAACATTTGTACATATGGAAAGTCCGTGAGTCCATGGGAAGGAAACTGCCAACCTGAAGTTGTAGATTGTCAAGTAGATGCAAATAACATGACCAGTACTGAAGGACAAACTGTAGAGACAGTGGATAACTTCTTGTCATCTGCATCTCAAGAGGGATAG 891 0.4388 MLIHFHGLLPRTNLRVTYKRKNHHASGATKGQKENMDDGNAELSDKLSNNVLFLNPESSSSFQASTSVNTVPELCRSSSRTCTHTHTCNPPGPDAAHTHTCYHTHTQIFSPEDDDDKEHTKSKPKRPSGNREAVRKYREKKKAHTAYLEEEVKKLRMINQQLARKLQGQALLEAELARLRSILAHLKGKIDSELGAFPFQKQCNSSYIFKEGDAGFLSTASTIGLQCQNNLPCFLPHAGSSSQVNICTYGKSVSPWEGNCQPEVVDCQVDANNMTSTEGQTVETVDNFLSSASQEG* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01404 296 PANTHER CCAAT/ENHANCER BINDING PROTEIN 28 198 IPR031106 GO:0003700|GO:0006351
Lapu5g01404 296 MobiDBLite consensus disorder prediction 108 136 - -
Lapu5g01404 296 MobiDBLite consensus disorder prediction 27 41 - -
Lapu5g01404 296 SUPERFAMILY Leucine zipper domain 125 167 IPR046347 GO:0003700|GO:0006355
Lapu5g01404 296 CDD bZIP 130 177 - -
Lapu5g01404 296 SMART brlzneu 118 185 IPR004827 GO:0003700|GO:0006355
Lapu5g01404 296 Pfam Basic region leucine zipper 121 175 IPR004827 GO:0003700|GO:0006355
Lapu5g01404 296 Gene3D - 110 187 - -
Lapu5g01404 296 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 120 186 IPR004827 GO:0003700|GO:0006355
Lapu5g01404 296 MobiDBLite consensus disorder prediction 22 43 - -
Lapu5g01404 296 MobiDBLite consensus disorder prediction 108 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01404 Lapu-Chr5 27258558 27260853 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01404 79 223 bZIP Transcription Factor Family AT3G51960 54.730 9.75e-52 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu5g01404 bZIP_2 7.9e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01404 K25785 - gmx:100527780 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g01404 5 27258558 27260853 Lapu5g01404 5 27258558 27260853 ECH