Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01394 ATGGTGTGCATAAGGAAGGCGACGGTGAAGGACCTTCTGGCGATGCAAGCCTGCAACCTCTTCTGCCTCCCTGAGAACTACCAGATGAAGTACTACTTCTATCACATCCTCTCATGGCCTCAGCTTCTCTATGTCGCCGAAGACTACAACGGTCGCATCGTCGGCTACGTCCTCGCCAAGATGGAGGAGGAGACCACCGACTGCCACGGCCATATCACCTCCCTCGCCGTCCTCCGCACCCACCGCAAACTCGGTCTCGCCACCAAACTCATGACCGCCGCCCAGAACGCCATGGAACAGGTGTTTGGTGCCGAGTACGTGTCCCTGCACGTTCGCAAGAGCAACCGCGCGGCTTTCAATTTGTACACCGAGACCTTGGGGTACAAGATTCATGATGTGGAGGCTAAGTATTATGCGGACGGAGAGGATGCTTATGACATGAGGAAGCAGCTCAAGGGGAAGCAGCAGCAGCAGCAGCAGCAGCCGCACCATCATCACCACCACCATCACCACCACCACCACCACCACCATCATCACGAACATGGAGGCATGTGTTGTTCAGGGGAGGTGAAGGGGAATACCAAAGCCACCTGA 594 0.564 MVCIRKATVKDLLAMQACNLFCLPENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEETTDCHGHITSLAVLRTHRKLGLATKLMTAAQNAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQLKGKQQQQQQQPHHHHHHHHHHHHHHHHHEHGGMCCSGEVKGNTKAT* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01394 197 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 151 IPR016181 -
Lapu5g01394 197 MobiDBLite consensus disorder prediction 159 181 - -
Lapu5g01394 197 CDD NAT_SF 43 110 - -
Lapu5g01394 197 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 152 IPR000182 GO:0016747
Lapu5g01394 197 PANTHER N-TERMINAL ACETYLTRANSFERASE 1 178 IPR045047 GO:0004596|GO:0006474|GO:0031415
Lapu5g01394 197 Pfam Acetyltransferase (GNAT) family 39 128 IPR000182 GO:0016747
Lapu5g01394 197 Gene3D - 2 190 - -
Lapu5g01394 197 MobiDBLite consensus disorder prediction 149 197 - -
Lapu5g01394 197 FunFam N-alpha-acetyltransferase daf-31-like 2 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01394 Lapu-Chr5 27157425 27159517 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lapu5g01394 Acetyltransf_1 7.6e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01394 K20791 - gmx:100810038 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g01394 5 27157425 27159517 Lapu5g01394 5 27157425 27159517 ECH