Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01389 ATGTTTACAAATCTTCCTTGCAGTATGACGCGAACACTTTCAAGATACAACAAATGCCTTGGTTCTACGGATGCTACTGCAGCAGAAACTAAGACACAGAAGGAAGATTCTCAGATGGTGGACATTCTAAGAGACGAAATTTCAAAGATAGAAACAAAGAAATTACAGTTATTGGGTAAGGATCTGACAGGATTGGGAGTAAAGGAATTGCAAAATTTAGAGCAGCAACTTAGTGAGGGGTTATTGTCTGTCAAGGCAAGAAAGGAGGAACTACTTATGGAGCAGCTGGAGCAATCTAGAGTTCAGGAACAACGGGTTATGTTGGAGAATGAAACTTTGCGCAGACAGATTGAGGAGCTTCGTTGTCTGTTTCCGCAATCAGAAAGCATGGTCCCATTTCAATATCAATGTACTGAGAGAAAGAACACTTTTGTAAATACTGGTGCCAGATGTCTCAACTTGGCCAATAACTGTGGAAATGAGAAAGGAAGTTCCGACACAGTATTTCATTTCGGGTTGCCTGCTGGTGTTCAAGAGGAAGGCCCACAAGAAAGAAACCTTTTCAAATGA 570 0.4123 MFTNLPCSMTRTLSRYNKCLGSTDATAAETKTQKEDSQMVDILRDEISKIETKKLQLLGKDLTGLGVKELQNLEQQLSEGLLSVKARKEELLMEQLEQSRVQEQRVMLENETLRRQIEELRCLFPQSESMVPFQYQCTERKNTFVNTGARCLNLANNCGNEKGSSDTVFHFGLPAGVQEEGPQERNLFK* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01389 189 Coils Coil 103 123 - -
Lapu5g01389 189 ProSiteProfiles K-box domain profile. 33 123 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lapu5g01389 189 Pfam K-box region 29 117 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01389 1 179 MADS-box Gene Family AT5G13790 43.094 8.40e-38 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01389 - - gmx:547732 327.405