Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01375 ATGGCCCCGCCGAAGAAGCCGAGAAGCGCGTCGAGGAACCCTGAACTCATCAGGGGTATTGGGAAATACTCCAGGTCGCAGATGTACCACAAGAGGGGCATCTGGGCCATCAAGGCCAAACACGGCGGCGCTTTCCCCCGCCATGACCCCAAGCCCAAGCCTGACGCCCCGGCCCAGAAGCCGCCCAAGTTTTACCCCGCCGACGATGTCAGGAAGCCCCTCGTCAACAAGCACAAGCCCAAACCAGCCAAACTCAGTGTTAGAAAATGTGGGACATAA 279 0.5914 MAPPKKPRSASRNPELIRGIGKYSRSQMYHKRGIWAIKAKHGGAFPRHDPKPKPDAPAQKPPKFYPADDVRKPLVNKHKPKPAKLSVRKCGT* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01375 92 MobiDBLite consensus disorder prediction 1 23 - -
Lapu5g01375 92 PANTHER 60S RIBOSOMAL PROTEIN L6 2 86 IPR000915 GO:0003735|GO:0005840|GO:0006412
Lapu5g01375 92 MobiDBLite consensus disorder prediction 42 56 - -
Lapu5g01375 92 MobiDBLite consensus disorder prediction 40 92 - -
Lapu5g01375 92 Pfam Ribosomal protein L6, N-terminal domain 4 61 IPR005568 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01375 Lapu-Chr5 26939712 26941383 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01375 10 85 Cytoplasmic Ribosomal Protein Gene Family AT1G18540 76.316 2.09e-40 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01375 K02934 - gmx:100784101 153.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g01375 5 26939712 26941383 Lapu5g01375 5 26939712 26941383 ECH