Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu5g01374 | ATGGTTAGAATAGATATTTTGAACCCAACATTTGTGATCTTGGTATCGCCACGCAACCTTTGTTTGTGTGGAGTTCTTCTCATGGCTGAGCCATCATTCTCCTCTTCCTTCACCTATGACGTCTTCCTCAGCTTCAGAGGAGAAGATACTCGTTACAGCTTCACCGGCAATCTCTACAGAGCCCTTCGTGACAGCGGAATCTGCACCTTCATCGACGACGAGGAGCTCCGCAAAGGAGACGAGATCACCTCTGCGCTCGAGAAGGCAATCGAAGGCTCCAGAATCTTCATCATCGTCCTCTCTCACAACTACGCCTCTTCCTCTTTCTGCTTGAACGAGCTCGCCTACATCCTTCCCTACGCTAAGAGAAAGGGTTTGCTGGTTTTGCCTCTCTTCTACGATGTCGTTCCTTCCCACGTGCGCCACCACACAGGTAGCTTTGGAGAAGCATTGGATACTCATGAGAAGAGGTTCAAAGGTACGAGTGAGGGTTTTGAGCTTAACATGGAGAAGCTCAACGAATGGAAGATGGCTCTACGTCATGTAGCTAACTTCTCTGGCTATCATTTCAAACATGGGGAGGAGTATGAATATGAGTTTATCAAGAAGATAGTTGAATTGGTCTCTAACAAGATTAACCGTGCTCCTTTACATGTTGCGGATTATCCAGTTGGACTAGAGTCACGAGTGCTAGAAATAAAGTTGCTTCTAGATGTAGGATCTGATGATGGTGTCCACATGGTTGGGATCTATGGACTCGGTGGAGTTGGTAAAACCACACTTGCTGTTGCAGTTTATAATTCCATCGCTGACCATTTTGAAGGCTTGTGTTTCCTTGAAAATGTGAGAGAGAATTCAAACAAACACGGCCTACATCATCTTCAGAGCCTTCTTCTTTCTCAAATGGTTGGAGAAAAGAATATCAACATATCTAGTGTGAAACAAGGAATTTCAATTATGCAGCACAGGCTAAGGCAGAAGAAGATTCTTCTGATTCTAGATGATGTTGACAAGCTTGAACAGTTACAGGCAATTGTTGGAAGACCTGATTGGTTTGGTCCTGGAAGTAGAGTCATCATCACAACTAGGGACAAACAATTGTTGTCATGTCACTTGGTTGAAAAAACATATGAAGTGAAGAAGTTGAAAAAGAAGGATGCTTTTCGACTGCTAAGTTGGAAAGGTTTTAGAACAGAAGAAGTTGATACAAGTTATGTGAATGTCATGGATCGTGTACTAGCTTATGCTTCTGGCCATCCATTGGCTTTGGAAGTAATAGGTTCCAAGTTGTTTAGAAAAAGTATAAAAGAATGGGAATCTGCCATCAACCAGTATGAGAAAATTCCTAACAATCAGATCCTGGAGATACTTAAAATAAGTTTTGATTCTTTAGAGGAAGTAGAGAAGAGTGTTTTTCTTGATATTTCATGTTGCTTCAAAGGATATGCATTGTCAGAGGTGGAAGATATACTTCGTGCTCATTATGGTGATTGCATGAAATATCATATTGGAGTGTTGGTTGAAAAATCTCTCATAAAATATAGGTGGGGTTGTATAGTTACATTGCATGACTTGATAGAAGACATGGGTAAAGAAATTGTCCGACAGAAATCACCACAAAAGCCAGGGAAGCGCAGTAGATTATGGTCACCAGAAGATATAATTCAAGTTTTGGAAGACAACTCGGGAAGTGGAGAAATTGAAATCATATGCTTGAACTCCTCCTTACTTGACAAAGAAGAAACAGTAGAATGGAACAGAAAGGCCTTCAAGAAGATGAAAAACCTCAAAACACTTATCATTAAAAATGGTAATTTTTCGGAAGGTCCTAAATATCTTCCAAATAGTTTAAGAGTACTGGAATGGTTGAAATATCCTTCACAAGGGTTACCCCCAGATTTTCGTTCAAAGAAACTTGTCATTTGCAAATTACCCTCAAGTTGTTTTGGGACACTCGAACTGGCTGAGTTATCAAAGAAGTTCATGAATATGACTGTTTTGAATTTTGACGAATGTGAAGGTTTAACACAGATACCTGATGTATCTGGGCTGCCAAATTTAGAAAACATTTCATTCAAGAATTGTAAGAGTTTAATTACAATTCATGACTCCATTGGGTTCCTAGATAAGCTTAACTCCTTGAATGCTGTTGGTTGCAGCAGGCTTAGGAGTTTTCCACCTCTCAAATTGACTTCTCTGGAAAATCTTGAACTTTCATATTGTTACAGTCTTGAGTGCTTCCCAGAAATATTAGGAAAAATGGAAAAGATGACAGAACTTGTGTTGGAGGACTGTGACATCAAGGAAATTCCATTTTCATTTAAAAATCTCACTGAGCTTCAAACATTAGATTTGCGTTTCTGTCGAATGTTAAGGTTACCAACTAGCATTGTCATGATGCCAAAACTGTCTGAGATTATCGCTTGGGAAGCTGAAGGATGCCTATTTCCAAAACAGGTTGAGGGTGAAGAGAAAGTAAGCTCAATGGTGTCTTCAAATGTAGATTCTCTTCGTCTCTCAGGGTGCAAACTCTCGGATGATTTTTTCCCAACAACTCTTGCATGGTTTTCTAATGTAAAAGATTTGAACCTCTCAAGGAATAATTTCACCGTTCTTCCTGAATGCATCAGCAATTGTCATTTTTTATATAAGCTTACTTTAGATTACTGTCATAGTCTTCGAGAGATTAGAGGGCTTCCGCCAAACATACAACATTTATCTGCAATAAATTGTACATCCTTCACTTCTTCTTGCAGAAGTACTTTACTGAATCAGAAACTGCATGAGGCTGGAAACACCATGTTTTCGTTTTCAGGAGCAATGTTTCCAGAATGGTTCGAGAACCACAGTCGGGGACCATCTTATTCTTTCTGGGTTGGGAACAAATTCCCTGCCATTGCTCTTTGTATTGCTATTGGACCAACTCATGTGGAATATGTTCAAATTGTTGGACCTATCATGATCATCAATGGCATTGAATGTTCACTTCCTGGGGTCGATCCCTATTTAAAGATGCTCCCTGATCACACATATCTTTTCGATCTGCAGCAGATAGTTTTTCCGGATTATCTAGACAGATTTGTTTCAGAAAATGAATGGAACCACGTGGAGATTACATACGCAGTCGAGAAGAGATTCAGTAAAAAAGACAAACATGTGGTGATCCCGGTCTCTATAGAAAATGGAATCTATGTGTCAAAACAGAGGAGCAGCATGGAGAATGTTCGATTCACTGATCCCCGGAAAAAAAGAAGATTAGATGTTGATTCGGAGTTGTAA | 3279 | 0.3992 | MVRIDILNPTFVILVSPRNLCLCGVLLMAEPSFSSSFTYDVFLSFRGEDTRYSFTGNLYRALRDSGICTFIDDEELRKGDEITSALEKAIEGSRIFIIVLSHNYASSSFCLNELAYILPYAKRKGLLVLPLFYDVVPSHVRHHTGSFGEALDTHEKRFKGTSEGFELNMEKLNEWKMALRHVANFSGYHFKHGEEYEYEFIKKIVELVSNKINRAPLHVADYPVGLESRVLEIKLLLDVGSDDGVHMVGIYGLGGVGKTTLAVAVYNSIADHFEGLCFLENVRENSNKHGLHHLQSLLLSQMVGEKNINISSVKQGISIMQHRLRQKKILLILDDVDKLEQLQAIVGRPDWFGPGSRVIITTRDKQLLSCHLVEKTYEVKKLKKKDAFRLLSWKGFRTEEVDTSYVNVMDRVLAYASGHPLALEVIGSKLFRKSIKEWESAINQYEKIPNNQILEILKISFDSLEEVEKSVFLDISCCFKGYALSEVEDILRAHYGDCMKYHIGVLVEKSLIKYRWGCIVTLHDLIEDMGKEIVRQKSPQKPGKRSRLWSPEDIIQVLEDNSGSGEIEIICLNSSLLDKEETVEWNRKAFKKMKNLKTLIIKNGNFSEGPKYLPNSLRVLEWLKYPSQGLPPDFRSKKLVICKLPSSCFGTLELAELSKKFMNMTVLNFDECEGLTQIPDVSGLPNLENISFKNCKSLITIHDSIGFLDKLNSLNAVGCSRLRSFPPLKLTSLENLELSYCYSLECFPEILGKMEKMTELVLEDCDIKEIPFSFKNLTELQTLDLRFCRMLRLPTSIVMMPKLSEIIAWEAEGCLFPKQVEGEEKVSSMVSSNVDSLRLSGCKLSDDFFPTTLAWFSNVKDLNLSRNNFTVLPECISNCHFLYKLTLDYCHSLREIRGLPPNIQHLSAINCTSFTSSCRSTLLNQKLHEAGNTMFSFSGAMFPEWFENHSRGPSYSFWVGNKFPAIALCIAIGPTHVEYVQIVGPIMIINGIECSLPGVDPYLKMLPDHTYLFDLQQIVFPDYLDRFVSENEWNHVEITYAVEKRFSKKDKHVVIPVSIENGIYVSKQRSSMENVRFTDPRKKRRLDVDSEL* | 1093 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu5g01374 | 1092 | ProSiteProfiles | TIR domain profile. | 37 | 212 | IPR000157 | GO:0007165 | |
Lapu5g01374 | 1092 | SMART | AAA_5 | 244 | 378 | IPR003593 | GO:0016887 | |
Lapu5g01374 | 1092 | SUPERFAMILY | L domain-like | 582 | 923 | - | - | |
Lapu5g01374 | 1092 | PRINTS | Disease resistance protein signature | 775 | 791 | - | - | |
Lapu5g01374 | 1092 | PRINTS | Disease resistance protein signature | 416 | 430 | - | - | |
Lapu5g01374 | 1092 | PRINTS | Disease resistance protein signature | 323 | 337 | - | - | |
Lapu5g01374 | 1092 | PRINTS | Disease resistance protein signature | 247 | 262 | - | - | |
Lapu5g01374 | 1092 | SMART | till_3 | 38 | 185 | IPR000157 | GO:0007165 | |
Lapu5g01374 | 1092 | Pfam | TIR domain | 39 | 215 | IPR000157 | GO:0007165 | |
Lapu5g01374 | 1092 | Pfam | NB-ARC domain | 237 | 465 | IPR002182 | GO:0043531 | |
Lapu5g01374 | 1092 | Gene3D | Ribonuclease Inhibitor | 571 | 745 | IPR032675 | - | |
Lapu5g01374 | 1092 | Gene3D | - | 36 | 209 | IPR035897 | - | |
Lapu5g01374 | 1092 | Gene3D | - | 381 | 465 | IPR042197 | - | |
Lapu5g01374 | 1092 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 39 | 796 | IPR044974 | GO:0006952 | |
Lapu5g01374 | 1092 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 35 | 214 | - | - | |
Lapu5g01374 | 1092 | Gene3D | - | 210 | 375 | IPR027417 | - | |
Lapu5g01374 | 1092 | Gene3D | Ribonuclease Inhibitor | 746 | 932 | IPR032675 | - | |
Lapu5g01374 | 1092 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 209 | 475 | IPR027417 | - | |
Lapu5g01374 | 1092 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 29 | 188 | IPR035897 | - | |
Lapu5g01374 | 1092 | SUPERFAMILY | "Winged helix" DNA-binding domain | 452 | 559 | IPR036390 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu5g01374 | Lapu-Chr5 | 26930491 | 26935550 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu5g01374 | 31 | 877 | WRKY Transcription Factor Family | AT4G12020 | 30.126 | 1.84e-78 | 281 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu5g01374 | - | - | gmx:100780257 | 1306.58 |