Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01370 ATGGGGAAGTTATCAACCATGTTGCATGGTAGGGGCAAGAACCGCAAGGAGTCATCATCATGCGCATTAACAAAATGTTTTCACCACGGTAACAGAAGAGATATTGGCATGAGAATTGCAGAAGAATGGAATATTGATTTTTCTGATCTCTTAATTGGGTACAAGTTTTCTCATGGTGCCCATAGTCGAATTTACCATGGTATATACAAGCAGAAGCATGTTGCCATCAAAATTTTCGAAGTACGAGAATGCGAGGAAAAGGGAACCCTTAGATCTCTTTTAGAGACACAGTTTTCAAGAGAAGTCACATATCTACCTCGTCTCTACCATCAAAATGTGGTGAGTTTCATAGCAGCATACAAAGACGCTGATTCTTATTACATTCTCACCGAGTATGAACAAAAGGGGTCTTTAAGGGTGCATTTGAACAAGTTTGAGTCCAAGCCAATTTCTCTCAAGAAGGTGATGGCTTTTGCTTTGGATATTGCTCGTGGAATGGAGTATGTGCATGCACAAGGTATCATTCATAGAGACCTTAAACCTGAAAATATCCTTGTAGATTGGAACTCTCACCTCAAAATTTCTGATTTTGGCATTGCTTGTGAGGCTTCAAAGTGTGACTCAATGAGGGGAACATACCGTTGGATGGCACCAGAGATGATCAAAGGCAAATGCCATGGGAGGAAGGTTGATGTGTACAGTTTTGGTCTTATTTTGTGGGAGCTGGTGAGTGGGAAAATGCCATTTGACGACATGAATTCAATTCAGGCTGCTGTTGCTGTAGCAGATAAGAATTCAAGGCCTCTTATTCCCACAAATTGCCCACATGGTTTGAGAGATTTGATCAATCAATGTTGGGACTTGAAACCAGAGAAGAGACCTGAATTCTGGCAGATTGTTCGAGTTTTGGAGCAATTGATCAAAGAAATTTTTCTCTAA 939 0.4068 MGKLSTMLHGRGKNRKESSSCALTKCFHHGNRRDIGMRIAEEWNIDFSDLLIGYKFSHGAHSRIYHGIYKQKHVAIKIFEVRECEEKGTLRSLLETQFSREVTYLPRLYHQNVVSFIAAYKDADSYYILTEYEQKGSLRVHLNKFESKPISLKKVMAFALDIARGMEYVHAQGIIHRDLKPENILVDWNSHLKISDFGIACEASKCDSMRGTYRWMAPEMIKGKCHGRKVDVYSFGLILWELVSGKMPFDDMNSIQAAVAVADKNSRPLIPTNCPHGLRDLINQCWDLKPEKRPEFWQIVRVLEQLIKEIFL* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01370 312 Gene3D Transferase(Phosphotransferase) domain 1 135 310 - -
Lapu5g01370 312 ProSiteProfiles Protein kinase domain profile. 50 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01370 312 CDD STKc_MAP3K-like 58 303 - -
Lapu5g01370 312 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 29 306 - -
Lapu5g01370 312 SUPERFAMILY Protein kinase-like (PK-like) 34 303 IPR011009 -
Lapu5g01370 312 PIRSF ILK 4 311 - -
Lapu5g01370 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Lapu5g01370 312 PRINTS Tyrosine kinase catalytic domain signature 130 143 IPR001245 GO:0004672|GO:0006468
Lapu5g01370 312 PRINTS Tyrosine kinase catalytic domain signature 230 252 IPR001245 GO:0004672|GO:0006468
Lapu5g01370 312 PRINTS Tyrosine kinase catalytic domain signature 274 296 IPR001245 GO:0004672|GO:0006468
Lapu5g01370 312 PRINTS Tyrosine kinase catalytic domain signature 168 186 IPR001245 GO:0004672|GO:0006468
Lapu5g01370 312 PRINTS Tyrosine kinase catalytic domain signature 211 221 IPR001245 GO:0004672|GO:0006468
Lapu5g01370 312 Gene3D Phosphorylase Kinase; domain 1 38 134 - -
Lapu5g01370 312 SMART serkin_6 50 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01370 312 Pfam Protein tyrosine and serine/threonine kinase 54 303 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01370 Lapu-Chr5 26894591 26895529 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01370 8 306 MAP Kinase Kinase Kinase AT5G58950 54.305 6.35e-118 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lapu5g01370 PK_Tyr_Ser-Thr 1.3e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01370 - - var:108332641 500.36