Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01366 ATGGTGGTGCAGGCCAAGACTGATGGCTACAAGGCCCTCGAGCTTCAAAGAATGAAGAAATGCAGCTCTAGGACTGATGTATATGCTTTTGGCATACTACTGCTTGAATTCTTGATTGGTAAGAAGCCTGGAAAGAATGGAAGAAGTGGTGAGTATGTGGACTTGCCCTCAATGGTGAAGGCACTGAAGCTGGCAATGGTGTGCTGTGCACTTGTGGCATCTGTGAGGCCAAGCATGGATGAGGTTGTGAGGCAGTTGGAGGAGAATAGACCAAGGAACATGTCTGCACTATACAGCCCTACAGAAACAAGAAGTGGAAGTGTTACACCATTTTGA 336 0.4702 MVVQAKTDGYKALELQRMKKCSSRTDVYAFGILLLEFLIGKKPGKNGRSGEYVDLPSMVKALKLAMVCCALVASVRPSMDEVVRQLEENRPRNMSALYSPTETRSGSVTPF* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01366 111 Gene3D Transferase(Phosphotransferase) domain 1 2 102 - -
Lapu5g01366 111 Pfam Protein tyrosine and serine/threonine kinase 10 91 IPR001245 GO:0004672|GO:0006468
Lapu5g01366 111 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 2 60 - -
Lapu5g01366 111 SUPERFAMILY Protein kinase-like (PK-like) 6 93 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01366 Lapu-Chr5 26821308 26821733 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01366 1 111 Receptor kinase-like Gene Family AT3G24660 60.563 1.91e-48 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu5g01366 PK_Tyr_Ser-Thr 2.5e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01366 - - gmx:100814814 185.652