Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01365 ATGTGCACCGAGATCAATTGCTTGCTATATGGTTGTGTTTGGATCTATGTTTACTCCGATTTTAACGAAAATGAACCTAAAGCTGGAAAACCAGTACTGAACTGGGCCAGGCGACACAAGATTGCATTAGGCATAGCGAGAGGTCTAGTTTATCTTCACACAGGACTAGAAGTTCCTGTCACTCATGCAAATGTAAGGTCCAAGAATGTGCTTGTGGATGACTTCATTGCAGCCAGGCTAACTGATTTGGCCTGGGCAAGCTGA 264 0.4432 MCTEINCLLYGCVWIYVYSDFNENEPKAGKPVLNWARRHKIALGIARGLVYLHTGLEVPVTHANVRSKNVLVDDFIAARLTDLAWAS* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01365 87 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 31 83 - -
Lapu5g01365 87 Gene3D Transferase(Phosphotransferase) domain 1 19 87 - -
Lapu5g01365 87 SUPERFAMILY Protein kinase-like (PK-like) 29 83 IPR011009 -
Lapu5g01365 87 ProSiteProfiles Protein kinase domain profile. 1 87 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01365 Lapu-Chr5 26819115 26821284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01365 24 84 Receptor kinase-like Gene Family AT3G24660 73.770 3.09e-27 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu5g01365 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01365 - - gmx:100791722 112.849