Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01362 ATGTGGAGATTTAAGCCATTCGGCCACAAAGAGCAGACTGGTCTTGAAGGCCGCACTGTAGATGTTGGCAATCTTAAAATAAACATTATTAAGGCCATTGCGGAAGGAGGGTTCTCTTGTGTCTACCTAGCCCGTGATGCTGTACATATGTCAAAGCAATATGCTTTGAAGCACATGATATGCAATGATGACGAATCACTTGGATTGGTAAAGAAGGAGATATATGTGATGAAGATGCTGGTAGGACATCCCAATGTTGTCACACTTCTTGCACATTCTATCTTTGATATGGGTAGGACAAAGGAGGCATTCCTTGTGATGGAATTTTGTGAGAGGTCTCTGGTCAATGTGCTGGAGAGCCGCGGAGCTGGTTATTTTGATGAGAAACAGGTTCTTTTGATCTTCAGGGATGTCTGTAATGCAGTTTTTGCTATGCACTGCTTGTCCCCACCTATTGCACACCGAGACTTGAAAGCGGAGAATCTTTTATTAAGTTCAGATGGGTTATGGAAGTTATGTGATTTTGGAAGCACTTCCACCAATCACAAACGTTTTGAAAAGCCAGAAGAAATGGGGATTGAGGAAGACAATATCAGGAAGTACACAACTCCAGCCTACAGGGCCCCTGAGATGTGGGATCTGTTCCTGAGAGAAGTCATCAGTGAGAAGGTAGATATATGGGCTCTTGGATGTCTTCTTTTTCGCATATGCTACTTCAAAAGTGCGTTTGATGGGGAATCAAAGCTCCAAGTCTTAAATGGAAACTACCGTATTCCCGATTTACCAAAATACAACTCATCTATCACGGACTTAATAAGAGACATGCTCCAAGCTAGACCAGATGACAGACCAGATATCACGCAGGTCTGGTTTCGTGTTAATGAGCAACTGCCTATTAATCTACAGAAGTCATTACCTGACAGGCCACCCGAATCACCCTCTCCCAACAATCATGAAGGTATGTCAATGCCCTCTAAGAGATCACCTCCAATGCCTCGTAGAAACCCACCTCCTCCACCTTCATCTGGAGAACCCAAAAGTACACCACAGCCATCCCCTGCTTCTAGGGGAGGGGGAACTGGGGGGCAGCTTGGTGCTTTCTGGTCCAGTCAGCATGCAAAGGATCCACTTGTCACTGAGGACAAGAGCAAACCAATCTTTGATGAAGAACCATCTAGCCACCATATGTCACTGAAACATGATAGACTGCGTCCTGAAAATGAACAATTAGCCAAAAACGTTAGTACTAGCAAAGTGGTTAATGCACAAACTCATACTGTGAAAAGCAGTACACATGGAAAATTACAGAAGCCTGATACGACACCCTCAAAGGATTTTGAAATAAACTTATTCCAAGATAAAGATCGTATGGAGAATACAGCTAACTTTCAAAACCAGGCTTTTAACACTTTTGTTGCTGAATTCGATACCTCTAAGCTCAACACTGGACTTACTAACAAACATGAAAGGGAACAAGCGTTAGAGGCTGAAGTGGAGAAACTCAAAGAGCAGCTGAAGGAAGCTAACGTGGAAAAAGCTGAAATAACATCTAAGTTTGAAAAGCTTTCTGCTATCTGCCGATCCCAAAGGCAAGAATTGCAGGATCTCAAGCAAGCACTAGCAGCTCGGACCCCTTCACCACGTAGAGAGGGTTTGAAAACCTCTCCTGGAGTCACATCATCTGCACCTGCATCTATGGATAGAACTGAATGGAAAACTCCAAGTTCAGAACCTAAGTCATGGCAAGCTTTTCCTGAGGAACCCCAACAACAAAAGTCCCTTTCAGCAGAAAATACTACCAAATCAGTCAGGACAAATAATGGTCTGCAGAACAAGCAACCTGTTCCACTAGCTACTAATTTTGATTCATGGGGTTTTGGAACTGATAGCTTCAGTGCTGTACCTGCTGGCAGTTCACAGCAAAGACCTAGCAGTGCTGGAGGTAAGTCTCCGGGTTTTGGTGAGGCAAAGGCCTTTGAGAGCAAACCAACTTCTCAACCAGCTGGTTGGGCTGGTTTTTAA 2022 0.4397 MWRFKPFGHKEQTGLEGRTVDVGNLKINIIKAIAEGGFSCVYLARDAVHMSKQYALKHMICNDDESLGLVKKEIYVMKMLVGHPNVVTLLAHSIFDMGRTKEAFLVMEFCERSLVNVLESRGAGYFDEKQVLLIFRDVCNAVFAMHCLSPPIAHRDLKAENLLLSSDGLWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKYTTPAYRAPEMWDLFLREVISEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKYNSSITDLIRDMLQARPDDRPDITQVWFRVNEQLPINLQKSLPDRPPESPSPNNHEGMSMPSKRSPPMPRRNPPPPPSSGEPKSTPQPSPASRGGGTGGQLGAFWSSQHAKDPLVTEDKSKPIFDEEPSSHHMSLKHDRLRPENEQLAKNVSTSKVVNAQTHTVKSSTHGKLQKPDTTPSKDFEINLFQDKDRMENTANFQNQAFNTFVAEFDTSKLNTGLTNKHEREQALEAEVEKLKEQLKEANVEKAEITSKFEKLSAICRSQRQELQDLKQALAARTPSPRREGLKTSPGVTSSAPASMDRTEWKTPSSEPKSWQAFPEEPQQQKSLSAENTTKSVRTNNGLQNKQPVPLATNFDSWGFGTDSFSAVPAGSSQQRPSSAGGKSPGFGEAKAFESKPTSQPAGWAGF* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01362 673 PANTHER SERINE/THREONINE PROTEIN KINASE 1 649 - -
Lapu5g01362 673 MobiDBLite consensus disorder prediction 536 673 - -
Lapu5g01362 673 Coils Coil 484 539 - -
Lapu5g01362 673 Gene3D Transferase(Phosphotransferase) domain 1 10 306 - -
Lapu5g01362 673 MobiDBLite consensus disorder prediction 329 347 - -
Lapu5g01362 673 MobiDBLite consensus disorder prediction 383 402 - -
Lapu5g01362 673 MobiDBLite consensus disorder prediction 553 647 - -
Lapu5g01362 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Lapu5g01362 673 SMART serkin_6 27 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01362 673 SUPERFAMILY Protein kinase-like (PK-like) 28 343 IPR011009 -
Lapu5g01362 673 CDD STKc_GAK_like 26 298 - -
Lapu5g01362 673 FunFam probable serine/threonine-protein kinase DDB_G0280111 10 305 - -
Lapu5g01362 673 MobiDBLite consensus disorder prediction 300 367 - -
Lapu5g01362 673 MobiDBLite consensus disorder prediction 413 445 - -
Lapu5g01362 673 ProSiteProfiles Protein kinase domain profile. 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01362 673 Pfam Protein kinase domain 29 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01362 Lapu-Chr5 26789438 26795011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01362 26 292 Miscellaneous Gene Families AT2G34180 29.181 6.82e-19 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Lapu5g01362 Pkinase 1.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01362 K08853 - gmx:100808507 1135.17