Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01358 ATGCGTATGGAAAACCACCAAAACCACAAGGCAGAGGCAGAACCTGACAGAGAGAAGAACCACCAACATAACCAAGTGTGGGGCACGTGGGAGGAGTTGCTGCTAGCGTTCGCCGTCAACCGCCATGGCTACAAGGACTGGGACACCGTCGCCATGGAGGTTCAGTCGCGCGCCACGCGCCTCCTCGCCACGGCGCGCCACTGCGAGCAGAAATTTAACGATCTCAGCCGCCGATTCGCCGACCAATGCAACGAAGGCGTTACGCCGCCGCAACAGAACGGCGCCGGCGACGGCGAAAACTCCGATCACGTGCCGTGGCTAGACGAATTGCGGAAACTCCGTGTCGCCGAACTCCGCCGCGAGGTCCAGCGCCGCGACGTTTCCATTCTGTCGCTGCAGTTGGAGGTGAAGAGGCTGGAGGAGGAAAAGGCGAAAGAGAATGACGGTAAAGACGACGAGAAACCAGATCTGGCGGTTTCCGGTGAAGCGCGGCAGGAAAACGACAAAACCGGCGGAGAAGTTGAGGAAGTTGGACCGGCGAATTCCGAACCGGAGAGAACCGCGAACGCTGACAAGATGTTGCCAACAACGGGCGACGAATCGGACCGGGAGAATCAATCAGTTAACGAGTCTAACTCGACCGGTTCGAGGTTCGATAAAACCGGAGAAGGCGATTTGAAGTTAAGAGTCGAACCGGCTCCGGTTCAGACCGGTTCGGTAGAACCGGATCCGGTTGCGAGGAAGGGAAAGCCGGTTGGGGAGGAATCGAATAACGGAAGCTACGATGCGTTGGCGAAGGTGCCAACGTGTGAGTCGGTGCCTCCGAGTGACGAGAGGAAGGTGGAGCAGGACGATGACTCGTCTGAGTTGCACGACTCGGTGGCACACTCCGGCGAGGGAGGAACAAGGGAGAGCAGCGAGGTGCAGAGCTCCGCTAGCTTGACGCGGAAGAGGAAGACGCGACGGAGAAAAGAGGTTTCCGGCGGAGACGGTCGCGGTGCCGGCACCTCCACACCGCCGGAGAACGACGAGGTGGCGATGGTTAAATCAGAACCGTTGGTTGGGGTTTTGGAGTTGATCAAGGGGCACGAGCACAGCTTATTGTTCGAGCGCCGTCTTGAAAGCCAGCAGGAGTCGGACAGATACAAAGACATAGTGAAACAGCCACTGGACTTGGAAACCATACAATTAAGAATCCAAAAAGGTCACTACTCCTCATGCACTAATGCATTCTTCCGCGACCTCCTCCTCCTCTTCACCAACGCCATCGTGATCTTCCCCCGTGACTCCCCGGAGTCACAGGCGGCTCGGCAACTGCACCGCCTTGTCACCACCGAGATGAAGAACCACAGCCAAGCACAATCCGACCTTATGCCCCGGAAGAACGATTCTCTCCCTCCTAACGTACCACTAGCCAAACCAGATTCTCTCTTTTCCAAGAACAAAGCATCTGGTCCTATATTGGTTTGCCGCAAACGCAGTTCAATGTCAGCCAAACCTTCCTCGACCACCTTTGGTCAAAAGGGTGACCAACCCATCGTAAATGAGAAGAAGGAAAAGCCATCTTCTGATGCAAAACCTCCCATGAAACCTTCTTCTTCTGATACAGACGAAGAAGAGCCTCCCAAGGCTAAGGAAAAGCCTGTCACTGGAGCGAGAAGCCTGAGAAGGAGCAACAAGAACCTCAACAGCAAGAAACTTCCCTCTAACTCCACACCTAAGGCAGGGTCCTCGGCTAACAAGCCATTGGAGACCCCTAAAACAGAGAAGAGCAAAGGAGAAGGAGGGCCAGACAAGAAGAGGAATGCTGCTGCAGATTTCCTGAAACGGATAAAGCGAAATACTTCAGTGGAAGCAGTGAAGGGTGGTAGTGGTGGTGGTGGAGGAGGAAGTAGCAGCAGCAGCAAGGGAGGTGGAGGTGGTGTTGGTGTGAAAGAGCAGAAGAAAACGGTGAATAATGGAAAGGGGGATAAAGGGAAAGAAAGGGCATCAAGGCACAGTGTTGGAGGAGGGTCAGGGTCTGGGGATAAAAGGAATAAGAACATTGAGAACAACTCTCAGTCAAAGAGGAGTGTTGGTAGACCTCCAAAGAAGGCAGCAGAGACAAATGCAGCAGGTGCAAAGCGTGGGAGGGAAAATAGTGCTAGTGCCGGCAAGGATAAGCGACCCAAGAAACGTTCCAAGAAATGA 2190 0.5443 MRMENHQNHKAEAEPDREKNHQHNQVWGTWEELLLAFAVNRHGYKDWDTVAMEVQSRATRLLATARHCEQKFNDLSRRFADQCNEGVTPPQQNGAGDGENSDHVPWLDELRKLRVAELRREVQRRDVSILSLQLEVKRLEEEKAKENDGKDDEKPDLAVSGEARQENDKTGGEVEEVGPANSEPERTANADKMLPTTGDESDRENQSVNESNSTGSRFDKTGEGDLKLRVEPAPVQTGSVEPDPVARKGKPVGEESNNGSYDALAKVPTCESVPPSDERKVEQDDDSSELHDSVAHSGEGGTRESSEVQSSASLTRKRKTRRRKEVSGGDGRGAGTSTPPENDEVAMVKSEPLVGVLELIKGHEHSLLFERRLESQQESDRYKDIVKQPLDLETIQLRIQKGHYSSCTNAFFRDLLLLFTNAIVIFPRDSPESQAARQLHRLVTTEMKNHSQAQSDLMPRKNDSLPPNVPLAKPDSLFSKNKASGPILVCRKRSSMSAKPSSTTFGQKGDQPIVNEKKEKPSSDAKPPMKPSSSDTDEEEPPKAKEKPVTGARSLRRSNKNLNSKKLPSNSTPKAGSSANKPLETPKTEKSKGEGGPDKKRNAAADFLKRIKRNTSVEAVKGGSGGGGGGSSSSSKGGGGGVGVKEQKKTVNNGKGDKGKERASRHSVGGGSGSGDKRNKNIENNSQSKRSVGRPPKKAAETNAAGAKRGRENSASAGKDKRPKKRSKK* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01358 729 MobiDBLite consensus disorder prediction 299 313 - -
Lapu5g01358 729 Coils Coil 129 149 - -
Lapu5g01358 729 MobiDBLite consensus disorder prediction 554 584 - -
Lapu5g01358 729 MobiDBLite consensus disorder prediction 512 553 - -
Lapu5g01358 729 MobiDBLite consensus disorder prediction 447 729 - -
Lapu5g01358 729 MobiDBLite consensus disorder prediction 650 665 - -
Lapu5g01358 729 Pfam Bromodomain 357 437 IPR001487 GO:0005515
Lapu5g01358 729 MobiDBLite consensus disorder prediction 142 173 - -
Lapu5g01358 729 MobiDBLite consensus disorder prediction 83 103 - -
Lapu5g01358 729 SUPERFAMILY Bromodomain 353 457 IPR036427 GO:0005515
Lapu5g01358 729 MobiDBLite consensus disorder prediction 447 461 - -
Lapu5g01358 729 ProSiteProfiles Bromodomain profile. 361 433 IPR001487 GO:0005515
Lapu5g01358 729 Gene3D - 342 457 IPR036427 GO:0005515
Lapu5g01358 729 CDD Bromodomain 356 447 - -
Lapu5g01358 729 CDD SANT 27 75 IPR001005 -
Lapu5g01358 729 MobiDBLite consensus disorder prediction 677 692 - -
Lapu5g01358 729 MobiDBLite consensus disorder prediction 585 616 - -
Lapu5g01358 729 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 13 729 - -
Lapu5g01358 729 MobiDBLite consensus disorder prediction 142 345 - -
Lapu5g01358 729 MobiDBLite consensus disorder prediction 1 23 - -
Lapu5g01358 729 MobiDBLite consensus disorder prediction 495 510 - -
Lapu5g01358 729 MobiDBLite consensus disorder prediction 273 298 - -
Lapu5g01358 729 Pfam Myb-like DNA-binding domain 26 74 IPR001005 -
Lapu5g01358 729 SMART bromo_6 125 452 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01358 Lapu-Chr5 26747365 26752704 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lapu5g01358 Bromodomain 2.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01358 - - gmx:100779988 1082.01