Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01320 ATGAGCCACGATGTGTCAGAAGAGGCACACCCTAGTGTTCATAGCAGTTGTGCAAATTCAGGAAACAACTCACCAACTCATCCCAATAATGTGAACCAAGCAGAAAAAGAGACCTTTACAGCAACAACTGTCGACAGTTCAGGAAGTGAACCTGGACAATTGGATCAGGTTCCAAAACCTGGTAATTCTAAGTTGGAAGGTAAACCAAGGCCCCAGAAGCTAATGCCACCAAACAGGAACACATCTGACTTAAACCCTCAACACCAAAGTCCAAGCACAACAAAGAATCATGCCAAGACAATGTCTGTGTCCACCCCACATTCAAAGACCCCGAATCATGGTAGCGGTTCTAGTTCTCGCAGTGACAGCTTAGAGAGCACAAGTGCACCCATTAGGCCACACACTGGGGGTGATGTGAGGTGGGAAGCTATCAACATGGTTTCAAGGTGTGGCCCTCTCAATCTCAGCCACTTCAGGCTTCTCAAGCGCATTGGTTATGGAGACATTGGGAGTGTGTACCTTGTCGATCTTAAAGGGACTAGGACCTACTTTGCCATGAAAGTAATGGACAAAGCAGCACTCATAAGCAGAAATAAGCTTCTGAGGGCACAGACAGAAAGGGAGATTCTTGGACTCCTTGATCACCCCTTTCTCCCAACTTTGTATTCTTACTTCGAAACTGACAAGTTTTACTGTCTGGTGATGGAGTTTTGTAGTGGAGGTGACCTTCATTCTCTTCGACAGAAGCAACCTAACAAGTGTTTCTCTGAAGAAGCTGCCAGGTTTTATGCTTCAGAGGTTTTGCTAGCTCTGGAGTACCTGCACATGCTTGGCATCGTATACAGAGACTTAAAGCCAGAAAATCTTCTAGTGAGAGATGAAGGGCACATCATGCTCTCAGATTTTGACTTATCCCTTCGCTGCTCCGTCAGTCCTACACTAGTCAAGTCTTCATCTGCTCATGCAACCAACAATAGTGGTGGCAACAATGATTCTAGCAGCGTAATAACTGATGACCAAGCAGTGCCAACCACAACTCAGGCATCAAGTTTTTTCCCGCGCATTTTGCCTTCAAAGAAGAACCGCAAGGCAAAGTCAGATTTTGGCTTATTGGTTGGCGGAGCACGCCTTCCTGAACTGATGGCAGAACCCACTAATGTGAGATCAATGTCATTTGTAGGGACACATGAGTATCTTGCTCCTGAGATTATCAAAGGAGAGGGTCATGGTAGCGCAGTAGATTGGTGGACTTTTGGGATCTTCTTGTATGAGCTGTTGCATGGAACAACCCCTTTCAAGGGTGCAGGGTATAAAGCCACACTTTTTAATGTTGTTGGACAACCACTTAGGTTCCCAGAAACTCCCCAGGTCAGTTCAGTGGCTCGTGACCTTATTAGGGGATTGCTGGTGAAAGAGCCTCAGAAGAGAATTGCATATAAAAGAGGAGCTACAGAGATAAAACAACACCCATTTTTTGAGGGAATGAACTGGGCTCTAGTTAGAAGTGCCACACCTCCCCACATACCAGATACTATAGACTTCTCCAAGTATGCTACCAAAGAGACAGCCGCCCCAGTGGACAAGAAGATGGCAGACATTGCTAATGATAAAAACAGCAATAATGCTACTGATTCTTACATGGATTTTGAGTATTTTTAG 1659 0.4533 MSHDVSEEAHPSVHSSCANSGNNSPTHPNNVNQAEKETFTATTVDSSGSEPGQLDQVPKPGNSKLEGKPRPQKLMPPNRNTSDLNPQHQSPSTTKNHAKTMSVSTPHSKTPNHGSGSSSRSDSLESTSAPIRPHTGGDVRWEAINMVSRCGPLNLSHFRLLKRIGYGDIGSVYLVDLKGTRTYFAMKVMDKAALISRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGDLHSLRQKQPNKCFSEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSVSPTLVKSSSAHATNNSGGNNDSSSVITDDQAVPTTTQASSFFPRILPSKKNRKAKSDFGLLVGGARLPELMAEPTNVRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLHGTTPFKGAGYKATLFNVVGQPLRFPETPQVSSVARDLIRGLLVKEPQKRIAYKRGATEIKQHPFFEGMNWALVRSATPPHIPDTIDFSKYATKETAAPVDKKMADIANDKNSNNATDSYMDFEYF* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01320 552 PANTHER FLIPPASE KINASE 1-RELATED 23 518 - -
Lapu5g01320 552 MobiDBLite consensus disorder prediction 12 53 - -
Lapu5g01320 552 ProSiteProfiles Protein kinase domain profile. 158 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01320 552 MobiDBLite consensus disorder prediction 1 136 - -
Lapu5g01320 552 Pfam Protein kinase domain 159 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01320 552 Pfam Protein kinase domain 383 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01320 552 Gene3D Transferase(Phosphotransferase) domain 1 242 312 - -
Lapu5g01320 552 SMART serkin_6 158 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01320 552 MobiDBLite consensus disorder prediction 75 130 - -
Lapu5g01320 552 Gene3D Phosphorylase Kinase; domain 1 156 241 - -
Lapu5g01320 552 SUPERFAMILY Protein kinase-like (PK-like) 147 515 IPR011009 -
Lapu5g01320 552 FunFam Serine/threonine-protein kinase D6PK-like 156 241 - -
Lapu5g01320 552 FunFam Serine/threonine-protein kinase AGC1-7 385 510 - -
Lapu5g01320 552 FunFam serine/threonine-protein kinase D6PK-like 242 309 - -
Lapu5g01320 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 279 291 IPR008271 GO:0004672|GO:0006468
Lapu5g01320 552 CDD STKc_phototropin_like 156 513 - -
Lapu5g01320 552 Gene3D Transferase(Phosphotransferase) domain 1 386 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01320 Lapu-Chr5 26285088 26287182 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01320 124 552 AGC Kinase Gene Family AT1G79250 73.378 0.0 662
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lapu5g01320 Pkinase 4.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01320 - - gmx:100784301 952.97