Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01310 ATGGGAACGCCTGTGAACATCATCGTTGGATCACAGGTTTGGGTTGAGGATCCTGAGGTTGCATGGATTGATGGTGAGGTCACAGAAATCAATGGCAAAAATGTCACCATCATTGCCACAAATGGGAAAACTATGGTGGCAGAAATTTCATGCATATACCCCAAAGATACAGAAGCACCCCCTGCAGGAGTTGATGACATGACCAAGCTAGCTTACCTGCATGAGCCAGGAGTCCTGCATAACCTTGCAACTCGTTTTTCTCTCAATGAGATATATACATATACAGGGAATATCTTAATTGCAGTTAATCCTTTTCGAAGACTGCCACACTTGTATGACATCCATATGATGGAGCAGTACAAAGGAGCAGCATTTGGAGAGCTTAGTCCTCACCTTTTTGCTGTAGCTGACACATGTTACAGGGCAATGATAAATGAAAATGGAAGTCAATCCATTTTGGTAAGTGGAGAGAGTGGAGCTGGTAAAACTGAGACAACGAAAATGCTCATGAGATACCTAGCATTCATGGGGGGTAGATCTGCTACAGAAGGAAGAACTGTAGAACAACAGGTTTTAGAGTCCAATCCAGTGCTTGAAGCATTTGGAAATGCCAAAACTGTCAAAAACAACAATTCAAGTCGATTTGGTAAATTTGTTGAAATTCAGTTCGACAAGAATGGGAAGATATCCGGAGCTGCAATCCGAACATATCTCCTCGAAAGGTCACGAGTTTGCCAGGTCTCTGACCCAGAGAGAAACTATCATTGCTTTTACATGCTTTGTGCAGCACCACCAGAGGATGCCAACAAGTACAAGTTAGGGGATCCAAGGCAATTCCACTATCTTAATCAATCAAACTGTTATGAAGTGTCAAATGTAGATGATGCAAAAGAATACTTGGAGACCAGAAATGCAATGGATATTGTAGGCATTAGCCAAGAAGAGCAGGATGCTATCTTCCGTGTGGTAGCTGCAATCCTACATCTCGGAAACATTGACTTTGTTAAAGGGAAAGAAGTTGATTCTTCCAAATTGAAAGATGATAAATCACTCTTCCACCTCCAAACAGCTGCTGAGTTATTCATGTGTGATGCAAAATCTCTAGAAGATTCACTTTGCAAGCGTGTCATTGTAACTCCAGATGGTAACATCACCAAACCTCTGGATCCTGAAGCAGCTGCTTTGAGTCGAGATGCCTTGTCTAAGACTGTGTACTCGAAATTGTTTGATTGGATTGTGGACAAAATTAACAGTTCAATTGGTCAAGATTCCAATGCAGTAAGCATAATAGGAGTCCTTGACATTTACGGATTTGAAAGCTTTAAAATAAACAGTTTTGAGCAACTATGCATCAACCTAACGAATGAGAAGTTGCAACAACATTTTAATCAGCATGTATTCAAGATGGAGCAAGAAGAGTACACAAAGGAGGAAATAAATTGGAGCTATGTAGAATTTGTGGATAATCAGGATGTTCTTGATCTTATTGAGAAGAAACCAGGGGGAATAATCGCTCTTCTAGATGAAGCCTGCATGTTCCCAAAATCAACTCATGAGACTTTTGCACAAAAGATGTACCAGACATATAAATCCCATAAGCGCTTCAGCAAGCCAAAACTTGCTCGAACAGATTTCACAATTAACCATTATGCTGGAGATGTCACATATCAAGCAGATTATTTTCTTGATAAAAACAAAGATTATGTCGTAGCAGAGCATCAAGCTCTTTTATGTGCTTCCAAGTGCCCATTTGTTGCTAATCTTTTCCCTCCTTTACCAGAGGAGACTTCAAAGCAATCCAAATTCTCTTCCATTGGTTCACAGTTTAAGCAACAACTGCAATCTCTCATGGAGACACTGAATACAACAGAACCACATTACATACGATGTGTGAAACCAAATACAGTTTTGCAGCCTGGGATCTTTGAGAACTTCAACGTCTTGAACCAATTAAGATGTGGGGGAGTACTTGAGGCAATAAGGATTAGTTGTGCTGGATATCCAACAAAAAGAACTTTTGAAGAGTTTCTTGATCGTTTTGGAATGCTAGCTCCCGATGTCCTTGATGGCTCTGATGAGAAAAAGGCCTCTATGGCCATCTGTGATAAGATGGGGTTAAAAGGCTATCAAATGGGAAAAACAAAGGTATTTCTCAGAGCAGGTCAGATGGCTGAAATGGATGCACGAAGAGCTGAAGTCTTAGCTAAAGCAGCTAAACTCATACAGAGACAAATACGAACACATTTAACCAGGAAGGAGTTCATCACCCTAAGAAAGGCCACGATTCATATCCAGAAGATTTGGAGAGCTAAACTTGCACGTGAACTCTATGAACATATGAGGAGGGAAGCAGCTTCTATCCGGATACAGAAACATGTGCGTGCACACAGAGCAAGAATGTATTATACATCATTACAAGCATCAGCTATAATTCTTCAATCAGGGTTGAGAGCATTTGCAGCCCGGAATGAATATAGGTACAGAAGAAGAACAAAGGCTTCAACGAAAATTCAGACACAATGGAGAAAAGTCCAAGCTCTTTCTGATTACAAACAGCAGAAGAGAGCAACTGTTTCACTTCAATGTCTTTGGAGAGCTAGAATTGCAAGGAAAGAGCTCAGAAAGCTTCGGATGGCTGCAAGAGAAACTGGGGCACTTAAGGAAGCAAAGGACAAGTTGGAGAAGCGTGTTGAGGAGCTTACATGGAGACTAGATATTGAAAAGCACATGAGGATGGATCTTGAAGAAGCTAAAGGGCAAGAGATTGCAAAATTGCAAAATGCTTTACAAGAAATGCAAGGTCAGCTAGATGAAGCTCATGCTGCAATTATACATGAGAGAGAAGCAGCAAAAATAGCAATTGAACAAGCACCACCAGTAATTAAAGAGGTACCTGTTGTGGACGATACAAAGCTAGAGTTACTGACAAATAAAAATGAGGAGTTGGAGACTGAAGTAGAAGAACTTAACAAGAAGATTAAAGAGTTTGAAAAGAAGTTCTCAGAAGTTGAAAACGAGAATCAATCAAGGCTGAAAGAGGCGGAAGAAGCACAGCTTAAAGCAACTCAACTTCAGGAGACTATTGAAAGATTAGAATTGAGTTTGTCAAACCTTGAGTCTGAGAACCAGGTTCTATGCCAGAAGGCTTTGGAAGAATCCAAAAATGAAGAACTCTTTGAAGAGATCAAAATCCTCAAGGGTCAGATAGCAAATCTAGAGTCAGAGAATGAATTCCTAAGGAGCCAGGCAGCAGCAGCTGCTTTAGAGCAGAAAGTCCATCCAGAAAAAATAGAACCAGACCATTCAGCAGCTGCTTTAGAGCAGAAAGTTCATCTAGTGAAAACGGAACCAGACCATGAAGTTGCTGTTGTAGAGAAGATAAAAGTGCAACCAAGAGTTATTGCAGATAATATGACTTCCCAAATCAAGAATTTGGATAATGGAAATCAGACAGAGGAAGAATCGCATGCAAGAAAAGAACCAAGAGCACCAGCCTTCTTGCTTACTAAACAGAGATCACTCACTGATAGACAGCAGGAAAGTCATGATGCACTGCTCAAGTGTCTCGCTGAAGATAAGCGATTTGAGAAAAACAGACCAGCAGTTGCTTGTATTGTATATAAAGCACTTCTTCATTGGAGATCCCTTGAAGCAGAAAAGACACATATTTTTGATAAAATTATACACGCTATCCGATCATCTATAGAGAGTCAAGAAGGAATCCATGATCTAGCCTACTGGCTTTCAACTACTTCAACACTTCTGTTTTATCTACAATGCACAATGAAGGCCAGCAATACAACTAAGGCAGTGTCACGTAATCGAAACTCCCCTGCCACTTTGTTTGGAAAAATGGCACAAGGTTTGCGTTCATCTTCAATGGGCTTGGGGATTTCAAGTGGCTATAGTGGAATGGTGGAGAAGCCAAATGATCAATCTAAAGTAGAAGCCAAATATCCAGCTATTCTGTTTAAGCAACATTTAACTGCATATGTCGAGAAGATATATGGAATGATCCGTGATAGTCTAAAGAAAGAGATAAGCCCATTCTTAAATTTGTGTATACAGGCACCCAGATCCATAAGGACTAGATCAATAAGAGGGTCATCCAGAAACATCCATTCAAATATTGTTGCAAAACAACAAGCATTACATATGTACTGGAAAGGCATTGTGGACAAGTTAGATCATGTCTTGCGTATATTGTCTGATAACTATGTCCCTCCCATCATTACAAGAAAGATATTCAGTCAGGTTTTCTCATTCATGAATATCCAGCTGTTTAACAGTTTGTTGCTTCGTCGTGAGTGCTGTTCCTTTAGCAATGGAGAATATTTGAAGGCAGGATTGCATGAGTTGGAACTATGGTGTCTTAAAGCAACAGACCAGTTTGCTGGTTCATCTTGGGATGAACTCAAACATATACGCCAAGCTGTGGGATTTCTGGTTTTGCATCAAAAGACTCAAAAATCATTAGAGGAAATCACAAATGAGCTCTGCCCGGTGTTAAGTATTCCACAAATATATCGTATTGGAACTATGTTCTGGGATGACAAGTATGGAGCACAGGGATTATCTCCAGAAGTCATTAGCAGAATGAGAGTGATTATGACAGAAGACTCAATAAGCATACATAGTAGCTCATTCCTTCTAGAGGTGGATTCCAGCATACCATTCTTGATGGAGGAGATGTTTCGGTCCATGAGTGACATCCGCCTATCAGACATGGATGTGGATCCACCACCAATACTCAGGCAAAGGTCTGACTTCCAATTCTTGTTGCAACAAATGGACAGTGACTCTCAATGA 4809 0.4042 MGTPVNIIVGSQVWVEDPEVAWIDGEVTEINGKNVTIIATNGKTMVAEISCIYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLATRFSLNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGAAFGELSPHLFAVADTCYRAMINENGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSATEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNGKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDANKYKLGDPRQFHYLNQSNCYEVSNVDDAKEYLETRNAMDIVGISQEEQDAIFRVVAAILHLGNIDFVKGKEVDSSKLKDDKSLFHLQTAAELFMCDAKSLEDSLCKRVIVTPDGNITKPLDPEAAALSRDALSKTVYSKLFDWIVDKINSSIGQDSNAVSIIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKSHKRFSKPKLARTDFTINHYAGDVTYQADYFLDKNKDYVVAEHQALLCASKCPFVANLFPPLPEETSKQSKFSSIGSQFKQQLQSLMETLNTTEPHYIRCVKPNTVLQPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFEEFLDRFGMLAPDVLDGSDEKKASMAICDKMGLKGYQMGKTKVFLRAGQMAEMDARRAEVLAKAAKLIQRQIRTHLTRKEFITLRKATIHIQKIWRAKLARELYEHMRREAASIRIQKHVRAHRARMYYTSLQASAIILQSGLRAFAARNEYRYRRRTKASTKIQTQWRKVQALSDYKQQKRATVSLQCLWRARIARKELRKLRMAARETGALKEAKDKLEKRVEELTWRLDIEKHMRMDLEEAKGQEIAKLQNALQEMQGQLDEAHAAIIHEREAAKIAIEQAPPVIKEVPVVDDTKLELLTNKNEELETEVEELNKKIKEFEKKFSEVENENQSRLKEAEEAQLKATQLQETIERLELSLSNLESENQVLCQKALEESKNEELFEEIKILKGQIANLESENEFLRSQAAAAALEQKVHPEKIEPDHSAAALEQKVHLVKTEPDHEVAVVEKIKVQPRVIADNMTSQIKNLDNGNQTEEESHARKEPRAPAFLLTKQRSLTDRQQESHDALLKCLAEDKRFEKNRPAVACIVYKALLHWRSLEAEKTHIFDKIIHAIRSSIESQEGIHDLAYWLSTTSTLLFYLQCTMKASNTTKAVSRNRNSPATLFGKMAQGLRSSSMGLGISSGYSGMVEKPNDQSKVEAKYPAILFKQHLTAYVEKIYGMIRDSLKKEISPFLNLCIQAPRSIRTRSIRGSSRNIHSNIVAKQQALHMYWKGIVDKLDHVLRILSDNYVPPIITRKIFSQVFSFMNIQLFNSLLLRRECCSFSNGEYLKAGLHELELWCLKATDQFAGSSWDELKHIRQAVGFLVLHQKTQKSLEEITNELCPVLSIPQIYRIGTMFWDDKYGAQGLSPEVISRMRVIMTEDSISIHSSSFLLEVDSSIPFLMEEMFRSMSDIRLSDMDVDPPPILRQRSDFQFLLQQMDSDSQ* 1603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01310 1602 ProSiteProfiles Dilute domain profile. 1225 1539 IPR002710 -
Lapu5g01310 1602 Gene3D Kinesin motor domain 65 662 IPR036961 -
Lapu5g01310 1602 Coils Coil 972 1089 - -
Lapu5g01310 1602 ProSiteProfiles Myosin motor domain profile. 62 731 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu5g01310 1602 ProSiteProfiles IQ motif profile. 830 859 IPR000048 GO:0005515
Lapu5g01310 1602 FunFam unconventional myosin-Va 833 880 - -
Lapu5g01310 1602 Pfam Myosin N-terminal SH3-like domain 10 46 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lapu5g01310 1602 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lapu5g01310 1602 MobiDBLite consensus disorder prediction 1149 1163 - -
Lapu5g01310 1602 Pfam IQ calmodulin-binding motif 784 802 IPR000048 GO:0005515
Lapu5g01310 1602 Pfam IQ calmodulin-binding motif 855 874 IPR000048 GO:0005515
Lapu5g01310 1602 Pfam IQ calmodulin-binding motif 736 754 IPR000048 GO:0005515
Lapu5g01310 1602 Pfam IQ calmodulin-binding motif 807 826 IPR000048 GO:0005515
Lapu5g01310 1602 Pfam IQ calmodulin-binding motif 758 777 IPR000048 GO:0005515
Lapu5g01310 1602 Gene3D - 785 831 - -
Lapu5g01310 1602 Gene3D - 732 784 - -
Lapu5g01310 1602 Gene3D - 832 881 - -
Lapu5g01310 1602 ProSiteProfiles IQ motif profile. 805 834 IPR000048 GO:0005515
Lapu5g01310 1602 FunFam Myosin 2 312 429 - -
Lapu5g01310 1602 Gene3D - 252 310 - -
Lapu5g01310 1602 FunFam Myosin heavy chain 252 307 - -
Lapu5g01310 1602 Pfam Myosin head (motor domain) 64 719 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu5g01310 1602 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 882 IPR027417 -
Lapu5g01310 1602 FunFam unconventional myosin-Va 785 832 - -
Lapu5g01310 1602 Coils Coil 876 942 - -
Lapu5g01310 1602 PANTHER MYOSIN 54 1527 - -
Lapu5g01310 1602 ProSiteProfiles IQ motif profile. 782 808 IPR000048 GO:0005515
Lapu5g01310 1602 SMART MYSc_2a 56 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu5g01310 1602 Pfam DIL domain 1415 1518 IPR002710 -
Lapu5g01310 1602 MobiDBLite consensus disorder prediction 1144 1163 - -
Lapu5g01310 1602 CDD MyosinXI_CBD 1176 1562 IPR037975 GO:0007015
Lapu5g01310 1602 Gene3D - 667 729 - -
Lapu5g01310 1602 SMART DIL_2 1414 1521 IPR002710 -
Lapu5g01310 1602 ProSiteProfiles IQ motif profile. 757 786 IPR000048 GO:0005515
Lapu5g01310 1602 Gene3D - 439 623 - -
Lapu5g01310 1602 ProSiteProfiles IQ motif profile. 734 761 IPR000048 GO:0005515
Lapu5g01310 1602 ProSiteProfiles IQ motif profile. 853 882 IPR000048 GO:0005515
Lapu5g01310 1602 FunFam unconventional myosin-Va 736 784 - -
Lapu5g01310 1602 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu5g01310 1602 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu5g01310 1602 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu5g01310 1602 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu5g01310 1602 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu5g01310 1602 CDD MYSc_Myo11 76 719 IPR036018 -
Lapu5g01310 1602 SMART iq_5 756 778 IPR000048 GO:0005515
Lapu5g01310 1602 SMART iq_5 733 755 IPR000048 GO:0005515
Lapu5g01310 1602 SMART iq_5 781 803 IPR000048 GO:0005515
Lapu5g01310 1602 SMART iq_5 804 826 IPR000048 GO:0005515
Lapu5g01310 1602 SMART iq_5 852 874 IPR000048 GO:0005515
Lapu5g01310 1602 SMART iq_5 829 851 IPR000048 GO:0005515
Lapu5g01310 1602 FunFam Class V myosin 439 578 - -
Lapu5g01310 1602 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Lapu5g01310 1602 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 785 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01310 Lapu-Chr5 26124401 26136664 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01310 116 1597 Myosins gene family AT2G31900 72.507 0.0 2224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01310 K10357 - gmx:100817933 2908.24