Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01304 ATGGCTGCTCAATTGCAAAACTCTGCAGATGAAATGAGGAGGAAGCTTCATGGTGATTCTTCAACGGCTGAACTCAATAATTCAAATACGGTTCCTTCGAAGGGTGCAAGTTCCCCATCTGATGCAAGATCATGTGTATCATCGATAGGAGATGCTTCTAGTAGTGCTAAGGAAGTTGATGTGGATCATGAGTACTTGTCCACAGATCAGGGTGTTCCTTATCCTGCTGGTGGCTATTATGGTTACTACTATCCAGGTTATGGTGGTTTCTTTGGAGAGTCAGACAACCAAGGGTACTATGTTGGTGCGGATACCATGGATCTTCAGTACCCTGTCATGCAAGCAGATAATGGATCTTATGTCTATCTCGTGCCAGGATTTCAGACTGGCTACCCTTCATACTTTCCTATAGGTACAGCTGGTGTTGAAGGACAGTATAATGTCTACCACCCTGGATCCATCTTTCAGCACCCGATTGGATCTCCTGGTTATTTTCCAACTTCTCTATCATATGGAGAATTATCACCATCAACATACTCATGGGATTCTTCTCTAATCACACAAGATGGGTCACAAGGACATGGTTATAGTGAACTGGCTGGTAAACCAAATGGTAGATCTAATTTGTCTACCCAGAGTCATTCTGGTGGTATTGTATCAAAGTCTTCACCCTCATCTAACTCAGCAGAAGTGGAGGGTTCAACACCATTATTGGAGGTCTCATCAACCCATGTTAAGAGAAACCAGCCAAAACAAACAAACAAAGCACCTGTTTCAGTCCTCCATTCACCTGTTGCCAAGTTTCCCACATACAATCAAGGAAAGAGTGCATTCCTCTATCCAAACAACTTGCTTAATGTGAAAACAAATACAAAGGGCTGGGTTAGTACTGATAAGTTGAAAAACAGAAACAAGGTCAATGATTCACTTAATGAGCAGAATCAAGGTCCTAGAACAGCTAATGCAAAAGGTGCATTAGTGTCTGGAGGTAATTCTGTGAGAAACTTGGCCCTAGGTGGTAGTGGAAATGTTACCAGCAAAATCAGGACAGATCAATACAACCTTCCTGATTTTCCTACCAAGTATGACCATGCACTTTTCTTTGTCATCAAATCATACAGCGAAGATGATATCCACAAGAGCATCAAATACAACGTGTGGGCAAGTACTCCTAATGGGAACAAGAGGCTGGATGGTGCATTTCAGGATGCACAGAAGAGAATGGAAGAAAAAGGATGCAAGTGCCCTGTGTTCCTTTTCTTTTCGGTCAATGCTAGTGGTCAATTTTGTGGAGTAGCTGAGATGACTGGTCGAGTTGATTTCAACAAAAGTATGGATTTCTGGCAACAAGATAAATGGAATGGATATTTCCCTGTCAAATGGCATATTATAAAGGATGTTCCAAATCCTCAACTACGGCACATAATACTTGAGAATAATGATCACAAGCCCGTCACAAATAGTAGAGACACACAAGAGGTGAGTTTTCCCCAAGGTGTTGAAATGCTCAACATTTTCAAGAACTACGTTGCAAGAACTTCCATATTGGATGACTTTGAGTTTTACGAAAGCCGCCAGAAGGTCTTGCAGGAGAAGAAAACAAGGCAATCTATGCCCCATACCAGTATACAGCATGTAGATGAATTAACCACAAAACTAGGGTCAGTAGAGCTATCATCATCATCTGTGAAGAACATGGAGGATCCTAAGGTGGTTGAGAAAGTGAATGACTGA 1734 0.4181 MAAQLQNSADEMRRKLHGDSSTAELNNSNTVPSKGASSPSDARSCVSSIGDASSSAKEVDVDHEYLSTDQGVPYPAGGYYGYYYPGYGGFFGESDNQGYYVGADTMDLQYPVMQADNGSYVYLVPGFQTGYPSYFPIGTAGVEGQYNVYHPGSIFQHPIGSPGYFPTSLSYGELSPSTYSWDSSLITQDGSQGHGYSELAGKPNGRSNLSTQSHSGGIVSKSSPSSNSAEVEGSTPLLEVSSTHVKRNQPKQTNKAPVSVLHSPVAKFPTYNQGKSAFLYPNNLLNVKTNTKGWVSTDKLKNRNKVNDSLNEQNQGPRTANAKGALVSGGNSVRNLALGGSGNVTSKIRTDQYNLPDFPTKYDHALFFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDGAFQDAQKRMEEKGCKCPVFLFFSVNASGQFCGVAEMTGRVDFNKSMDFWQQDKWNGYFPVKWHIIKDVPNPQLRHIILENNDHKPVTNSRDTQEVSFPQGVEMLNIFKNYVARTSILDDFEFYESRQKVLQEKKTRQSMPHTSIQHVDELTTKLGSVELSSSSVKNMEDPKVVEKVND* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01304 577 MobiDBLite consensus disorder prediction 307 326 - -
Lapu5g01304 577 FunFam YTH domain family 1, isoform CRA_a 344 521 - -
Lapu5g01304 577 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 96 541 IPR045168 -
Lapu5g01304 577 CDD YTH 367 506 IPR007275 GO:0003723
Lapu5g01304 577 MobiDBLite consensus disorder prediction 1 49 - -
Lapu5g01304 577 Gene3D ph1033 like domains 343 521 - -
Lapu5g01304 577 MobiDBLite consensus disorder prediction 203 258 - -
Lapu5g01304 577 Pfam YT521-B-like domain 367 507 IPR007275 GO:0003723
Lapu5g01304 577 ProSiteProfiles YTH domain profile. 365 506 IPR007275 GO:0003723
Lapu5g01304 577 MobiDBLite consensus disorder prediction 192 258 - -
Lapu5g01304 577 MobiDBLite consensus disorder prediction 21 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01304 Lapu-Chr5 25990372 25995740 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01304 K20102 - gmx:100791190 1033.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g01304 5 25990372 25995740 Lapu5g01304 5 25990372 25995740 ECH