Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01303 ATGCCTCTCTTCCTCTCCGACGAGGAGTTCTCGCGGTGCTCCGGTGACGGCGCCACCGTGGCTGCTAAGGCCGACGCGTTCATCCGCGGCCTCCTCCACGAGCTCGACACCGTCCGTGCCAAGGCCGACGCCGCCGACATCAACGCCGAGCAGAACTGTTCCCTCATCGAGCAGAAATACCTCTCCCTGGCCGCCGAGTTCTCCAAGTTGGAGTCCCAGGTCGCCGACCTCCAATCTTCCCTCGATCAGCGCCTCCGCGAACTCGCCGAGGCACAATCGCAGAACCACCAAATTCAATTGCAATCGGTTGAAAAAGATAGGGAGATAGAGCGGTTGAGGATGGAAGTGGGGGAGTTGCACAAGTCAAAGAGGCAGTTGATTGAGTTGAACGAGCAGAAGGATTTGGAGCTTAGTGAGAAGAATGCAACCATGAAGAGCTATCTTGATAAGATTGTCCATTTAAGTGAAAATGCTGCTCATAAGGAGGCTCGATTGAGTGAAGTTGAGACAGAATTAGCTCGGTGCCGGGCTGCTTGCAGTCGCCTTGAACAGGAGAAGGAGATTATTGAGAAGCAGAATTCTTGGCTTAACGAGGAGTTGAATGCTAAAGTCAACAGTGTTTTTGAGCTCCGCAGAAAGAACGCAGATTTGGAAGCTGATATTTCTTCCAAACTTACAGATATGGAGAGACAATTCAGTGAATGCTCTAAATCTCTTCAGTGGAATAAGGATAGAGTGAAGGAGCTTGAAATGAAGCTTAAATCTGTCCAAGAGGAATTAATTTCAGCTAAAGATACTGCTGCAGCTAATGAAGAACAATTATCTGCTGAACTCTCCACTGTGAATAAGCTTAATGAGCTATATAAAGAGAGTTCCAATGAATTGTCAAAAAAAGCAACAGACCTGGAGGGTGTGATAAAAGCGTTGGAGTCAGACTTAAAGCAAGTTGAAGATCATTATAAAGAGAAACTTAAGAAGGAATTATCTGCCAGAGAACAGTTTGAAAAGGAGGTCACTGATTTAAAGGAAAAGCTTGAGAAGTGTGAAGCTGAACGTGAGACAAGGAAGAAGACCAATGAACTGAATAGTCTTCCTCTTAGCAGTTTCACTACTGAATCGTGGATGGAATCCATAGAAGCCAATATCACGGTGGAGGAAAATAGTTTGCTAGTCCCGAAAATTCCTGTTGGAGTTTCTGGAACTGCATTGGCTGCTTCACTTCTTCGAGATGGGTGGAGTTTGGCTAAGATATATTCAAAATACCAAGAGGCTGTTGATGCATTGAGGCATGAACAATTGGGTAGGAAGGAGTCAGAGGCAGTACTGCAACGGGTTCTCTATGAGTTAGAGGAGAAAGCAGAAGCAATTATAGATGAAAGAGTGGAACATGAGAAGATGGCTGACGCATACTCCTTGATGAGCCAAAAGTTGCAAAACTCTCTTAACGAAAATTCCAGCCATGAGAAAACCATTCAGGAACTGAAGGCTGATCTGAAAAGGCATGAACGGGATTATAATCTTGTCCTGAAAGAGACTGATGACCTTCGAAAACAGGTGACAGTACTTTTGAAGGAATGTCGAGACATTCAACTTCGTTGTGGCTCGTTGGGGTATGATAATGTTGATGATTCTTCAAATATTGCTTCAAGGACAATTACAGAGACTGAAGCTGAGCATGTCATATCGGAGCACCTTTTGACCTTTAAGGACATTAATGGACTAGTTGAGCAGAATGTCCAACTTAGAAGCCTTGTACGTAGTCTTTCTGGCCAGATTGAACATCAGGAGGTGGAATTCAAGGAGAAGCTTGAAATGGAACTCAAAAAACATACTGAAGAAGCTGCTTCTAAAGTTGCAGCTGTTCTGCGGAGAGCTGAAGAGCAAGGGCAAATGATTGAGGCGCTTCATGCATCTGTTGCGATGTACAAGAGGTTGTATGAGGAGGAGCATAATCTTCATTTAGCTCATAACCATTCTTCAGAAGCACGTGCAGCTTTTGCTGAAGTTGGAAGAACCAACCTTACGACTTCAATTGAAAGTTCACAGGAGGCTGCTAAGAAGTCCCTGGAAAAAGCTGCTGAGCGTGTGAGATCCCTTGAGGATGATTTAGCAAAGTCTAGGAGTGAGATTATTTTATTGCGATCAGAACGTGACAAGATGGCACTTGAAGCAAATTTTTCGAGAGAGAGACTTGATAGCTTTATGAAAGAATTTGAGCATCAGAAAGCTGAAGCAAAAGGCATTTTAGAAAGAAATGTAGAGTTTTCTCAGCTGGTTGTTGACTACCAACGAAAATTGCGTGAAAGCTCTGAGTCATTGATGGCTGCTGAGGAGCTTTCTCGGAAACTCACTATGGAGTTGTCAGTTTTAAAACAAGAAAAGGAAATCATATCAAATGCTGAAAAAAGAGCTTCTGAAGAGGTTCGCAGTTTGTCTGAAAGAGTGCAGCGTCTGCAGGCTAGTTTGGGTACCATTCAAAGTACCGAGGAAGTTCGAGAGGAAGCAAGATCTGCAGAGAGGGTTAAGCAAGAAGAATATATAAGGAAATTGGAGAGGGAATGGGCTGAAGCCAAGCAAGAGCTAAATGAAGAGCGAGAAAATGTGCGGAGATTCACACTAGATCGGGACCAGACCATAAAAAATTCTCTGAGACAGGTTGAGGATATGAACAAAGAGTTAGCTAATGCATTGCGTGCAGTTGCATCTGCTGAATCAAGGGCTGCTGTTGCTGAGGCAAAACTCTCCAGTTTACAAAGAAAATTGGGTTCCACAGATGACAAGCTTGTCGAAATGGGTGGAGAGAGTGGACCTTCCACTTTTTCAAGTGATGAGGTTGTTACTGAATTGCAAAAAGCAAAGGAGGAGATAGAAAAGTTTAAAGAGGAAGCAGATGCCAACAAAGTTCACATGCTTCAGTATAAAAGCATTGCTGAGGTAAATGAAGATGCACTGAAACAGATAGAAATGGCACATGAGAAGTTTAAAACAGAGGCTGAGGAAGCAAAGAAAGTTCTAGAATCTGAACTTAATTCACTTAGAGAAAAGATGTTAGAGATTGAAAATGAATCTAGTTTGAAATATGAAGAAGTTGCTTCTGAAACTGTGGGAAAGGAGGAGGCTCTTACATCTGCTATGGCTGAAATCACAAATCTTAAAGAAGAAATTTTAACCAAATCTTCTCACATTTCAGCGTTGGAAATTCAGCTATCAGGTTTAAAGGAAAACCTGGACAGGGAGCATCAGAAATGGAGGGCTGCTCAAACTAATTATGAAAGACAGGTTGTTCTGCAGTCCGAAACTATTCAGGAGTTGACAAAAACATCTGAAGCACTATCCTTGCTGCAGGAGGAGGCATCTGAATTAAGGAAACTAACCAATACTCAGAAAATTCAAAATAATGAACTGAAGGCTAGGTGGGAAGAGGAGAAGGCGCAATTAGAGAATTCTAGGAATGATGCTGAAAAGAAATACAATGAAATCAATGAACAGAATAAAATATTACATAGCCAACTTGAGGCTTTTCATATACGATGGGCTGAGAAGGAGCGTAATGCTGCTGGTATTTCATCTGGAAGCAGTAGTGCAGATGCCTTTGGTGATGCTGGCCTTCAAAATGTGATTAATTATCTCAGACGATCGAAAGAAATTGCAGAAACAGAAGTTTCGTTGTTGAAACAAGAGAAGCTACGATTACAGTCACAGCTTGAGAGTGCTTTGAAGGCAGCGGAGTCTGCACATGCATCACTAGAATCTGAGCGTGCAAAATCAAAATCATTTTTGTTTACTGAAGAAGAGTTCAAATCATTGCAGCTTCAGGTCAGAGAAATGAACTTACTTCGCGAGAGTAACATGCAGCTCAGGGAAGAAAATAAACACAATTTTGAGGAGTGTCAGAAATTGCGCGAACTAGCACAAAAGGCTAGAGCTGAGACAGATAACCTTGAGAATGTCTTGAGGGAAAGAGAAATTGAGCTTGAAGGCTGTAAGAAGGAAATTGAAACACTAAAATTGGAAAAAGATAATCTCAATAACAAAGTTTTGGAGTTGCTTGAAAGAAGTAAAAATGTTGATGTTGAGGATTATGATCGAGTGAAGAAACTTGCTAGGGAAATTCAGGACAAACTAAGAGATAGGGATGCTCGGATTGAGGAAATGAGTAAGAGTCTATCTGAGAAGCAGGATTCTGTTTCACGTCTAGAGAAAGATCTTGCAAACTGCCGATTGGAGCTTGTAGAGAGAGAAAAGAGAATTAATGACATTCTGCATAATGAGGCTAACCTCAAACTTGATTCAGAGAAGCATAGGAAACTGCTGGCTCAGTTTAAGAAGAGGAATGATGTTTTGTCAAGGGAAAAGGAAGACATAGGTAAAGAGAACCAGCAACTTTCTAGGCAATTAGATGAAATTAAACAAGGCAAAAGGTCAACACCTGATACAACTGGTGAACAAGCAATGAAGGAAGAAAAGGACACAAGAATACAGATTCTGGAGAAACATCTGGAGAGGCTTAGAGATGAATTAAAGAAGGAGAAGGAAGAAAGTCGCCTAGAGAGAGGTAGACGACTGAAGACTGAAAAGGCCATAAAGGACTCTTACAACAATGTTGAGCAGGAGAAAACAAAATTTGTTAATGAAATTGAGAAGCATAAGGAGTCTCTGAAAAAGTTATCTGTTGAGGTTGAAAAGCTTAAGATTGTTATTGGCAATCTTCCGGAGGGTTTGAATGTGGTTCAACTTCTATCTGGATCGAATGTTGATGACTTTGCTGCTTCTTACATATCTGCTGTGGAAAGTTTTGAAAAGGAAGCTCATTCAATATTTCGTGAGCTTGGAGGTCGCGGTAATCTTGGAGATGCGGCTACAATTACAGATGGTTCAATAGCTGCTACAGGTTCTCTTGTCCAAGTTCAATCCCAAAGCATAACATCTCTGGCTGCTCCTGGTGCTAGCAGTTTGCCACCTAAAGCCACTGGAGAAAGTGAGAAAAGACTTGCATTACCATTACCCAAAGCTAGTGTTGAAACTCGTCGAACAGGTAGAAAATTGGTCAGGCCTAGACTCGTTAGACCTGATGAGACGCAAGGTGACACAGAAATGTCTGATGCCGAAGGACCAGTGGGCAAGCCTGCACCGTCTAGTGACACAGAAACAGGTAATTTTGCTCCATCGGCTCAACCCTCGGCTCGAAAACGTGTTGCTCCTATGTCCACTTCTGAATTACGTGAAGAATCAGTTGCATCTGGAGAGAAGAGTTCTGATGTAGTAACACCTGTGTTGAAGAAGTCAAAAGGGTCGGAGTCCCCAGAAGAGAGTACAGAAGAACAACCTGCTGCGGCTATGGAATTTACTGGCAGTCAACCAGCGACTGAAGAATTATTTGATAGCAGTGAGTTGCCACAAGGCCAAAATGAGGAAGGTGAGGCCCAAAATGAAGATGGTGAAATTGCTATTGGGAATGACGAGGAATCCAAAGATCCACAACACTTGGATGGTACAAGTCAAGAGGAATTACAAGGTGACAAAACTGGAAATTTAGATGAGAATCCGGATCAACCTGATGAGATGCAGAGGGATCATACTGACCCAGACAACCAACAGTCAACATTGCCCAGTGGTGACAGAGAAGAGGGAGAATTGTTGCCAGATGCTGGAGATCTTGAGGGTGGTAGTGATTTGTCTAACATTGTGGAAAACCAAGAATCTAGGGAGGGTCAATCTGAGTCTGCTGCTACACCTGAACGTTCCCCAGCTAGGGGGGATGATGATGCTCTAGAGGCTGGTGAGATTAACTCTCCTGAGCTTTCAAGCGATGACAAGAATGATGAGGTTGACTTGGTTGAGGAGGCTGCTGATGTTTCCGACAAGTTAATTGACGTTAATGAGCCAATATCAGTTGAGAGTGATCAGGTAGCTGACCCTACACCTGTTGTGAGTGATGGTGCTGCTACTTTGACAAGTAATGTTGCAGAAAGTAGTTCATCTAAGGTGAACTCACCTGTTCCAAGGCAAGGAACTCCTAGTGTCCCTTCTGAAACAGAAGAGACGACAAAGCAGGCATCACCTATCGGTAGTACTTCAACTACCATAAATTTGTCAGAGCGAGCACGGGAAAGGGCTCAAATGAGACAGGCTGGGTTGGTTTCTACCCCTAACGTTACTAGAGGTCGCGGAAGAGGTGTTCCACGAGGGCGAGCTCGCGGTCGGACAGTAGTACGCCGACCACCTCCATCATCTGGTGGTGACGCATGA 6249 0.4314 MPLFLSDEEFSRCSGDGATVAAKADAFIRGLLHELDTVRAKADAADINAEQNCSLIEQKYLSLAAEFSKLESQVADLQSSLDQRLRELAEAQSQNHQIQLQSVEKDREIERLRMEVGELHKSKRQLIELNEQKDLELSEKNATMKSYLDKIVHLSENAAHKEARLSEVETELARCRAACSRLEQEKEIIEKQNSWLNEELNAKVNSVFELRRKNADLEADISSKLTDMERQFSECSKSLQWNKDRVKELEMKLKSVQEELISAKDTAAANEEQLSAELSTVNKLNELYKESSNELSKKATDLEGVIKALESDLKQVEDHYKEKLKKELSAREQFEKEVTDLKEKLEKCEAERETRKKTNELNSLPLSSFTTESWMESIEANITVEENSLLVPKIPVGVSGTALAASLLRDGWSLAKIYSKYQEAVDALRHEQLGRKESEAVLQRVLYELEEKAEAIIDERVEHEKMADAYSLMSQKLQNSLNENSSHEKTIQELKADLKRHERDYNLVLKETDDLRKQVTVLLKECRDIQLRCGSLGYDNVDDSSNIASRTITETEAEHVISEHLLTFKDINGLVEQNVQLRSLVRSLSGQIEHQEVEFKEKLEMELKKHTEEAASKVAAVLRRAEEQGQMIEALHASVAMYKRLYEEEHNLHLAHNHSSEARAAFAEVGRTNLTTSIESSQEAAKKSLEKAAERVRSLEDDLAKSRSEIILLRSERDKMALEANFSRERLDSFMKEFEHQKAEAKGILERNVEFSQLVVDYQRKLRESSESLMAAEELSRKLTMELSVLKQEKEIISNAEKRASEEVRSLSERVQRLQASLGTIQSTEEVREEARSAERVKQEEYIRKLEREWAEAKQELNEERENVRRFTLDRDQTIKNSLRQVEDMNKELANALRAVASAESRAAVAEAKLSSLQRKLGSTDDKLVEMGGESGPSTFSSDEVVTELQKAKEEIEKFKEEADANKVHMLQYKSIAEVNEDALKQIEMAHEKFKTEAEEAKKVLESELNSLREKMLEIENESSLKYEEVASETVGKEEALTSAMAEITNLKEEILTKSSHISALEIQLSGLKENLDREHQKWRAAQTNYERQVVLQSETIQELTKTSEALSLLQEEASELRKLTNTQKIQNNELKARWEEEKAQLENSRNDAEKKYNEINEQNKILHSQLEAFHIRWAEKERNAAGISSGSSSADAFGDAGLQNVINYLRRSKEIAETEVSLLKQEKLRLQSQLESALKAAESAHASLESERAKSKSFLFTEEEFKSLQLQVREMNLLRESNMQLREENKHNFEECQKLRELAQKARAETDNLENVLREREIELEGCKKEIETLKLEKDNLNNKVLELLERSKNVDVEDYDRVKKLAREIQDKLRDRDARIEEMSKSLSEKQDSVSRLEKDLANCRLELVEREKRINDILHNEANLKLDSEKHRKLLAQFKKRNDVLSREKEDIGKENQQLSRQLDEIKQGKRSTPDTTGEQAMKEEKDTRIQILEKHLERLRDELKKEKEESRLERGRRLKTEKAIKDSYNNVEQEKTKFVNEIEKHKESLKKLSVEVEKLKIVIGNLPEGLNVVQLLSGSNVDDFAASYISAVESFEKEAHSIFRELGGRGNLGDAATITDGSIAATGSLVQVQSQSITSLAAPGASSLPPKATGESEKRLALPLPKASVETRRTGRKLVRPRLVRPDETQGDTEMSDAEGPVGKPAPSSDTETGNFAPSAQPSARKRVAPMSTSELREESVASGEKSSDVVTPVLKKSKGSESPEESTEEQPAAAMEFTGSQPATEELFDSSELPQGQNEEGEAQNEDGEIAIGNDEESKDPQHLDGTSQEELQGDKTGNLDENPDQPDEMQRDHTDPDNQQSTLPSGDREEGELLPDAGDLEGGSDLSNIVENQESREGQSESAATPERSPARGDDDALEAGEINSPELSSDDKNDEVDLVEEAADVSDKLIDVNEPISVESDQVADPTPVVSDGAATLTSNVAESSSSKVNSPVPRQGTPSVPSETEETTKQASPIGSTSTTINLSERARERAQMRQAGLVSTPNVTRGRGRGVPRGRARGRTVVRRPPPSSGGDA* 2083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01303 2082 Coils Coil 801 821 - -
Lapu5g01303 2082 Coils Coil 840 867 - -
Lapu5g01303 2082 PANTHER NUCLEOPROTEIN TPR-RELATED 1 2067 - -
Lapu5g01303 2082 Coils Coil 759 793 - -
Lapu5g01303 2082 Coils Coil 1269 1289 - -
Lapu5g01303 2082 MobiDBLite consensus disorder prediction 1674 1696 - -
Lapu5g01303 2082 Coils Coil 1062 1093 - -
Lapu5g01303 2082 MobiDBLite consensus disorder prediction 1788 1806 - -
Lapu5g01303 2082 Coils Coil 1104 1170 - -
Lapu5g01303 2082 Coils Coil 292 358 - -
Lapu5g01303 2082 Coils Coil 1297 1352 - -
Lapu5g01303 2082 Coils Coil 879 920 - -
Lapu5g01303 2082 Coils Coil 1532 1566 - -
Lapu5g01303 2082 MobiDBLite consensus disorder prediction 1979 2034 - -
Lapu5g01303 2082 Coils Coil 477 518 - -
Lapu5g01303 2082 MobiDBLite consensus disorder prediction 1450 1489 - -
Lapu5g01303 2082 Coils Coil 600 620 - -
Lapu5g01303 2082 Coils Coil 446 466 - -
Lapu5g01303 2082 MobiDBLite consensus disorder prediction 1817 1861 - -
Lapu5g01303 2082 Coils Coil 942 969 - -
Lapu5g01303 2082 MobiDBLite consensus disorder prediction 1645 2082 - -
Lapu5g01303 2082 Coils Coil 984 1022 - -
Lapu5g01303 2082 Gene3D - 260 525 - -
Lapu5g01303 2082 Coils Coil 74 106 - -
Lapu5g01303 2082 Coils Coil 1214 1252 - -
Lapu5g01303 2082 Coils Coil 239 273 - -
Lapu5g01303 2082 Coils Coil 1486 1520 - -
Lapu5g01303 2082 Coils Coil 682 716 - -
Lapu5g01303 2082 Coils Coil 1438 1472 - -
Lapu5g01303 2082 Pfam TPR/MLP1/MLP2-like protein 1047 1173 IPR012929 GO:0006606
Lapu5g01303 2082 Coils Coil 1382 1416 - -
Lapu5g01303 2082 MobiDBLite consensus disorder prediction 1892 1912 - -
Lapu5g01303 2082 Coils Coil 151 199 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01303 K09291 - gmx:100811882 3206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g01303 5 25955653 25985138 Lapu5g01303 5 25955653 25985138 ECH