Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01300 ATGGAAGCAGTGTGGGCAATGACTCTGATGCTGATTCTGGTACTGGTTCTGATATGCGCATGGAGGATGTTGAACTGGTTATGGTTAACTCCGAAGAGGCTTGAAAGGCTTCTCAGAGAGCAAGGCCTTAGGGGCAATCCATACACGCTTCTTGTTGGAGACATGAAGGAGATTGTGAAGATGAGAAAGGAAGCCCTCTCCAAACCCATGAATCTCTTCTCGCACGACATAGTGCCGCGTGTGTTTTCCTTTTACCATCATACTATCAACACACATGGCAAAAATTCTTTTATTTGGTTTGGACCAGTACCACAGGTGACCCTTACTGATCCTGAGTTAATCAAAGATGTATTAAACAAAATGTATGACTTTGCAAGGATTGATATGAATCCACAAGCCAGGTTACTAGCTCCTGGTCTTTTAAGCTACGAGAGAGAAGAATGGAGCAAACACAGAAAGATAATCAATCCTGCTTTCAATTTAGAGAAGTTGAAGAATATGTTACCACTATTTATCAAATGTTGTGATGATATGATTAGCAAATGGGAGGAAATGTTGTCTTCAAATGGATCAAGTGAAATGGATGTATGGCCCTTCCTTCAGAATTTGGCTAGCGATGCTATCTCTCGGACAGCATTTGGAAGTAGTTATGAAGAAGGAACAAGAATATTTCAACTTTTGAAAGAGCAAACTGAGCTTATAATGCAAATTATGTTTAAAGTTTACATTCCTGGATCGAGGTTTGTACCTAATGCTACCCATAGAAAGATGAATGCAATTGACAGGGAAATAAAAGCTTCACTTATGGATATTATTAACAACAGAGAGAGAGCACTAAAGGCGGGCCAAGCCACTCAAAATGACTTATTAGATATACTTCTCGAGTCAAATCACAAGAAAATTCAAGAACAGGGAAACAATAAGAATGTTGGAATGAATATTGAAGATGTTATTGAGGAATGCAAATTATTCTACTTTGCAGGAGAAAAAACCACTTCATCTTTGCTTGTTTGGACAATGATATTATTGAGTATGTACCCTGATTGGCAAACACACGCAAGGAAGGAAGTCTTACAAGTTTTTGGCAATCAAAAACCAGATTTTGATGGACTAAACCACCTTAAGATTGTTACCATGATTTTGAATGAGGTTTTAAGACTATACCCACCAATAGTTGCTCTTTTTCGAAAAGTTTGTCAAGATGCGAAACTTGGAAACTTATCATTAGCTACTGGAATGCAAGTTTGCTTGCCAACAATTTTGGTTCACCATGATTGTAAGCTCTGGGGTGATGATGCTAAGGAGTTCAAACCTGAGAGATTTGCTGAAGGAGTTCTAAAGGCCACAAATGGCATAGTTTCACTATTTCCCTTTGGAGGGGGTCCTAGGATATGCATTGGACAAAATTTCTCCTTGTTGGAAGCAAAGATTACCTTGTCAATGATTTTACAACATTTCTCGTTTGAACTTTCTCCAAACTATACCCATGCTCCAATTACCATGATTACTCTTCAACCCCAATATGGTGCTCATCTCATTCTACGTAAAAAAGTGAAAATATAA 1563 0.3832 MEAVWAMTLMLILVLVLICAWRMLNWLWLTPKRLERLLREQGLRGNPYTLLVGDMKEIVKMRKEALSKPMNLFSHDIVPRVFSFYHHTINTHGKNSFIWFGPVPQVTLTDPELIKDVLNKMYDFARIDMNPQARLLAPGLLSYEREEWSKHRKIINPAFNLEKLKNMLPLFIKCCDDMISKWEEMLSSNGSSEMDVWPFLQNLASDAISRTAFGSSYEEGTRIFQLLKEQTELIMQIMFKVYIPGSRFVPNATHRKMNAIDREIKASLMDIINNRERALKAGQATQNDLLDILLESNHKKIQEQGNNKNVGMNIEDVIEECKLFYFAGEKTTSSLLVWTMILLSMYPDWQTHARKEVLQVFGNQKPDFDGLNHLKIVTMILNEVLRLYPPIVALFRKVCQDAKLGNLSLATGMQVCLPTILVHHDCKLWGDDAKEFKPERFAEGVLKATNGIVSLFPFGGGPRICIGQNFSLLEAKITLSMILQHFSFELSPNYTHAPITMITLQPQYGAHLILRKKVKI* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01300 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Lapu5g01300 520 CDD CYP72 82 513 - -
Lapu5g01300 520 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01300 520 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01300 520 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01300 520 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01300 520 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01300 520 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01300 520 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01300 520 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01300 520 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01300 520 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01300 520 FunFam Cytochrome P450 734A1 28 518 - -
Lapu5g01300 520 SUPERFAMILY Cytochrome P450 78 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01300 520 Pfam Cytochrome P450 81 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01300 520 PANTHER CYTOCHROME P450 FAMILY MEMBER 18 510 - -
Lapu5g01300 520 Gene3D Cytochrome P450 28 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01300 Lapu-Chr5 25896905 25900270 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01300 20 516 Cytochrome P450 AT3G14610 56.513 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01300 - K23809 gmx:100782998 825.854