Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01297 ATGAGGCTCCACTACCTCACCCTTTTCCTTCTCTTGGTCCCTTTGAAGTTTAGCACCATTTATGGTTTCTCTCCTCAAGCAACTGTGCCCAATAAATCACTCAACAAGTCCTCATTATCCCCTCAGGCCTTTCTCTCCACTGGTCACTATCACACAACATGTCCTGATGCTGAAGGCATCATTTCACAGAAGGTTGCTGCTTGGGTTAAGCAGGACCCCACTTTGGCCCCTGCCATCATACGCCTTCATTTCCATGACTGTGCCGTTAGAGGATGTGATGGATCAATTTTGCTCAACCATCTAGGGAGTGAGAGGACTGCTTTAGGGAGCAAAACCCTTAGAGGTTTCCAATTGATTGATGATATCAAGAGTGAGTTGGAGAGGAAGTGTCCAGCAACAGTCTCTTGTGCTGATATTCTTACTGCTGCTGCAAGAGATGCCACTCTTTTGGTTGGAGGACCATTCTGGGAAGTCCCATTTGGCCGCAAAGATGGCAAAATTTCCTTAGCCACAGAAGCCAATTTGGTTCCCCAGGGCCATGAAAACATCACAGCTCTTATTGCATTCTTCGAAGAAAAAGGGTTGGACATTCTTGACTTGGTCACACTCTCAGGTTCACACACAATTGGGAGAAGCACTTGCTCTTCTGTTATGGATAGGATTTATAATTTTAACGGGACTCAAAAGCCTGATCCCTCACTCAATGTGTATTTCTTGAAGTTGTTGAGGAAGAGGTGTAAAAGGGAGTTGGATTTGGTGCATCTTGATGTTATAACACCTAGGACTTTTGACACAATCTATTATACAAACCTTATGAGGAAGGTGGGGTTGTTGTCAACAGATCAATCTCTCTTTTCAGATGCAAGAACAGCTCCTTTTGTCGAAGCATTTGCAACACAACCTTTCCTTTTCACTAGCCAGTTTTCAGTGTCAATGGTGAAACTTGGGAATGTTCAAGTTTTGACTAGGCCTAATGAAGGTGAAATAAGGGTTAATTGTAATCATGTCAATACTGTCTAA 1020 0.4343 MRLHYLTLFLLLVPLKFSTIYGFSPQATVPNKSLNKSSLSPQAFLSTGHYHTTCPDAEGIISQKVAAWVKQDPTLAPAIIRLHFHDCAVRGCDGSILLNHLGSERTALGSKTLRGFQLIDDIKSELERKCPATVSCADILTAAARDATLLVGGPFWEVPFGRKDGKISLATEANLVPQGHENITALIAFFEEKGLDILDLVTLSGSHTIGRSTCSSVMDRIYNFNGTQKPDPSLNVYFLKLLRKRCKRELDLVHLDVITPRTFDTIYYTNLMRKVGLLSTDQSLFSDARTAPFVEAFATQPFLFTSQFSVSMVKLGNVQVLTRPNEGEIRVNCNHVNTV* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01297 339 ProSitePatterns Peroxidases active site signature. 76 87 IPR019794 GO:0004601
Lapu5g01297 339 ProSiteProfiles Plant heme peroxidase family profile. 44 337 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu5g01297 339 CDD secretory_peroxidase 45 336 IPR033905 GO:0004601|GO:0042744
Lapu5g01297 339 ProSitePatterns Peroxidases proximal heme-ligand signature. 199 209 IPR019793 -
Lapu5g01297 339 Pfam Peroxidase 62 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu5g01297 339 Gene3D Peroxidase, domain 2 177 315 - -
Lapu5g01297 339 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu5g01297 339 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu5g01297 339 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu5g01297 339 PRINTS Haem peroxidase superfamily signature 76 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu5g01297 339 PRINTS Haem peroxidase superfamily signature 152 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu5g01297 339 FunFam Peroxidase 177 315 - -
Lapu5g01297 339 Gene3D - 48 337 - -
Lapu5g01297 339 PANTHER PEROXIDASE 25-RELATED 21 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu5g01297 339 FunFam Peroxidase 48 192 - -
Lapu5g01297 339 PRINTS Plant peroxidase signature 114 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu5g01297 339 PRINTS Plant peroxidase signature 198 210 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu5g01297 339 PRINTS Plant peroxidase signature 270 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu5g01297 339 PRINTS Plant peroxidase signature 310 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu5g01297 339 PRINTS Plant peroxidase signature 54 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu5g01297 339 PRINTS Plant peroxidase signature 254 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu5g01297 339 PRINTS Plant peroxidase signature 133 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu5g01297 339 PRINTS Plant peroxidase signature 78 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu5g01297 339 PRINTS Plant peroxidase signature 152 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu5g01297 339 SUPERFAMILY Heme-dependent peroxidases 45 337 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01297 Lapu-Chr5 25876680 25878634 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01297 44 338 Peroxidase AT1G30870 50.842 3.82e-109 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01297 K00430 - gmx:100792775 580.482