Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu5g01289 | ATGTTCTCTGTAGAGAGAGTGTTTGCACAGCACTTAGAGATGGGCCACCGTTGCTGCAGCAAACAGAAGATCAAAAGAGGACTATGGTCTCCTGAAGAAGATGAAAAACTTGTCAGATATATCAACAAACATGGACATAAAAGTTGGAGTTCTGTGCCAAAATATGCAGGATTGCAGAGATGTGGCAAGAGCTGCAGGTTGAGATGGATTAATTATCTTAGGCCGGATCTGAAGAGGGGTTCCTTCACTGCTGAAGAAGAGCAGATCATAATTGATATTCATAGAATTCTTGGAAACAGATGGGCGCAAATTGCTAAACACCTACCAGGAAGAACAGACAACGAGGTCAAGAATTTCTGGAACTCATGCATAAAAAAGAAGCTCATTTCTCAAGGGTTAGATCCACAAACCCACAATCTCCTGTCTTCTCATAGAAGAAGCTCAGCATCTACCATCTCCAGTATCCATCAAAAATCAAATTCCATTCTCATTATGAGTTCACACATACCAAATGCACCAGTGGAAACTACTTTTCAAACCTTTTCTTCGTTACCTAAACCTCCACCGAACATTGTTCAAACTCCCTCCAGCATTGTTACATCTGAATATCAAGCATCACCTGTTTTTTCAAATAAATTCTCATCAGAATTGCCTTATGAACTATTAATCGACAACGCCTCCAACATTTGTTCACCTTCATATATGAACCCCCTAGCAGTTGAATTGCCGAACAATGAAAACATTGTTAATTGGGTTTCAAGAGTTAATGTTGATGATTTCAGCACTCAAACACTTGAAGAGGGAACACAAGTGCAGGTGCAACAAGAGAAGGACCAGATTTGCGATAATATGGGAACTGATGTGAGAGAAGCTAACAAGGGCAATCTTGAGAGCAGTGCTTCTTTCGAGAGTTCTAACTTCGATTTTGGGTTGTTGGAGAGTGTACTTTCCTCCGAATTTGTCTCTAGTGATCTCAGTTGTATGGATGAACTTGCATGGAACCTTTAG | 1008 | 0.4048 | MFSVERVFAQHLEMGHRCCSKQKIKRGLWSPEEDEKLVRYINKHGHKSWSSVPKYAGLQRCGKSCRLRWINYLRPDLKRGSFTAEEEQIIIDIHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGLDPQTHNLLSSHRRSSASTISSIHQKSNSILIMSSHIPNAPVETTFQTFSSLPKPPPNIVQTPSSIVTSEYQASPVFSNKFSSELPYELLIDNASNICSPSYMNPLAVELPNNENIVNWVSRVNVDDFSTQTLEEGTQVQVQQEKDQICDNMGTDVREANKGNLESSASFESSNFDFGLLESVLSSEFVSSDLSCMDELAWNL* | 336 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu5g01289 | 335 | FunFam | MYB transcription factor | 18 | 79 | - | - | |
Lapu5g01289 | 335 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 21 | 73 | IPR017930 | - | |
Lapu5g01289 | 335 | ProSiteProfiles | Myb-like domain profile. | 74 | 124 | IPR001005 | - | |
Lapu5g01289 | 335 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 74 | 128 | IPR017930 | - | |
Lapu5g01289 | 335 | PANTHER | MYB DOMAIN PROTEIN 55 | 14 | 304 | - | - | |
Lapu5g01289 | 335 | FunFam | Transcription factor MYB86 | 80 | 154 | - | - | |
Lapu5g01289 | 335 | CDD | SANT | 29 | 73 | IPR001005 | - | |
Lapu5g01289 | 335 | ProSiteProfiles | Myb-like domain profile. | 21 | 73 | IPR001005 | - | |
Lapu5g01289 | 335 | SUPERFAMILY | Homeodomain-like | 23 | 120 | IPR009057 | - | |
Lapu5g01289 | 335 | Gene3D | - | 80 | 153 | - | - | |
Lapu5g01289 | 335 | SMART | sant | 78 | 126 | IPR001005 | - | |
Lapu5g01289 | 335 | SMART | sant | 25 | 75 | IPR001005 | - | |
Lapu5g01289 | 335 | CDD | SANT | 81 | 121 | IPR001005 | - | |
Lapu5g01289 | 335 | Gene3D | - | 26 | 78 | - | - | |
Lapu5g01289 | 335 | Pfam | Myb-like DNA-binding domain | 79 | 122 | IPR001005 | - | |
Lapu5g01289 | 335 | Pfam | Myb-like DNA-binding domain | 26 | 73 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu5g01289 | Lapu-Chr5 | 25780548 | 25782091 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu5g01289 | 13 | 265 | MYB Transcription Factor Family | AT3G12720 | 54.307 | 1.78e-90 | 271 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Lapu5g01289 | Myb_DNA-binding | 2.2e-16 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu5g01289 | K09422 | - | gmx:100791209 | 510.76 |