Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01280 ATGATAAACTTTGAAGCCTCTTCAAACACCATCTTTGTTTCTGTCCTTATTCTCTTGCCAACCCTGGCCTTAGGAGATTGCACATGTGACACAGATGAGGCCAAAAGCAGTGACTCAAGTGAAGTGCTTCACTACAAACTTGGCTCAATTGCTTCTGTGCTTGTTGCTGGTGCTCTTGGGGTGAGTCTCCCATTGCTGAGCAAGAGAATCCCTACTCTTAGTCCCAAGAATGACATATTCTTCATGGTTAAGGCCTTTGCCGCAGGGGTGATTCTTGCAACTGGGTTTGTCCACATACTTCCTGATGCATATGAAAGCTTGACTTCACCTTGCCTTAAGGAAAATCCATGGGGCAAGTTTCCCTTCACTGGATTTGTTGCCATGATGTCCTCAATAGGGACCTTAATGGTGGATTCATTTGCCACAGGATTCTACCATAGGCAACATTTTAATCCCTCAAAGCAGGTTCCTGCTGATGAGGAAATGGGAGATGAACATGCTGGTCACATACATGTTCATACTCATGCCACACATGGCCATGCTCATGGATCATCTGTTTCCTCTCAGGATTCAGAAACATCTGAACTAATTAGGCAACGCATCATATCACAGGTGTTGGAGATAGGAATTGTGGTCCATTCAGTGATAATTGGAATATCATTGGGAACTGCAGGGAGCATTGATACTGTAAAGCCTCTCCTGGTGGCCTTATCCTTTCATCAATTTTTTGAGGGGATGGGTCTTGGTGGTTGCATATCTCAGGCAAAGTTTGAGTCGAAGTCTACAGCAATAATGGCAACCTTTTTCTCCCTAACAACCCCAATTGGTATAGGAATTGGAATGGGGGTGTCAAGTGCTTACAAAGAGAATAGCCCTACTGCTTTGACTGTTGAAGGGATCTTCAATTCTGCTTCTGCTGGAATTTTGATTTACATGGCTTTGGTTGATCTTCTAGCAGCAGATTTTATGAACCCTAGATTGCAGAAAAATTTGAAGCTTCAACTAGGGGCAAATATATCCCTTCTTTTAGGCTCAGGTTGCATGTCCCTATTGGCCAGATGGGCTTAA 1068 0.4373 MINFEASSNTIFVSVLILLPTLALGDCTCDTDEAKSSDSSEVLHYKLGSIASVLVAGALGVSLPLLSKRIPTLSPKNDIFFMVKAFAAGVILATGFVHILPDAYESLTSPCLKENPWGKFPFTGFVAMMSSIGTLMVDSFATGFYHRQHFNPSKQVPADEEMGDEHAGHIHVHTHATHGHAHGSSVSSQDSETSELIRQRIISQVLEIGIVVHSVIIGISLGTAGSIDTVKPLLVALSFHQFFEGMGLGGCISQAKFESKSTAIMATFFSLTTPIGIGIGMGVSSAYKENSPTALTVEGIFNSASAGILIYMALVDLLAADFMNPRLQKNLKLQLGANISLLLGSGCMSLLARWA* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01280 355 PANTHER ZINC/IRON TRANSPORTER 42 348 - -
Lapu5g01280 355 Pfam ZIP Zinc transporter 44 352 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lapu5g01280 355 NCBIfam ZIP zinc/iron transport family 29 355 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01280 Lapu-Chr5 25631131 25634352 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01280 13 355 Inorganic Solute Cotransporters AT3G12750 64.857 8.65e-158 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01280 K14709 - gmx:100805124 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g01280 5 25631131 25634352 Lapu5g01280 5 25631131 25634352 ECH