Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01271 ATGGCGTCTCCCAGTGCCACCACTCTCTTCTCCTCTAACCCCATGTTTCCCTCCGACCACCACTCTCTCCCCTCCTCTCCAACCATTCCCAAATCTTTCACTGGCCTCTGCAAGCCCTTCCATTCGAGGGTTCCCACTTCCGTCCCCTTCTTCCATTGCAGAAGACCAAAGTTCTTTGTCAGAGCCACTGTGATAAAGTGGAGATGTCCAAAGCAAACACTCCCTCCCAATTGTGATACTGGTTTCCAAAAGAAACTCCTCTATCTAGAATCCATTGGAATTGACTCTTTCTCACTTATTGAAAACCATCCAACACTGATCACCACCTCTCTTACTGACATAAAATCCACCGTGGAATACATTACCTCCATGGATTTCTCCGCGATTGAGTTTCGGCGGATGGTTGGCATGTGCCCCGAGATTCTGACCACCAATGTCTCAGACATTATACCTGTCTTCACCTTCCTTCATCGCGAGGTTCATGTACGTTGTTCAGACATTAAGCACGTTATAAATCGCCGTCCCAGGTTGCTTGTCTGCAGTGTTAGTAAGCGACTTCGTCCTACCCTATACTTCCTCCAAAGTATTGGCATAGAAGAGGTAAACAAGCATACTGACTTGCTATCATGTAGTGTTGAAGAAAAGTTCATGCCCAGGATTGATTACTTTGAGAATATTGGGTTTTCTCGCCGTGATGCGACTTTAATGTTTCGCAGATTTCCTCAGCTGTTTTGTTATAGTATTAAAAATAATTTGGAGCCTAAATTCAGTTACTTTGTGGTGGAGATGGGGAGAGATTTGAAGGAGCTGATAGAATTTCCACAGTATTTCTCATTTAGCCTAGAGAATAGAATTAAGCCTAGGCATAAGAACTGTGTAGAAATGGGGGTGTGTTTTCCTCTCCCTGTCATGTTAAAAACAAAGGAAGTGAAATTTCAAAGTACATTGGAAGTATATGTAAATTCTTCAACACCCTTGAAAACATCCCCTCTGTGGTGTGCTGGCTATGATTTTTCTGAATAA 1023 0.433 MASPSATTLFSSNPMFPSDHHSLPSSPTIPKSFTGLCKPFHSRVPTSVPFFHCRRPKFFVRATVIKWRCPKQTLPPNCDTGFQKKLLYLESIGIDSFSLIENHPTLITTSLTDIKSTVEYITSMDFSAIEFRRMVGMCPEILTTNVSDIIPVFTFLHREVHVRCSDIKHVINRRPRLLVCSVSKRLRPTLYFLQSIGIEEVNKHTDLLSCSVEEKFMPRIDYFENIGFSRRDATLMFRRFPQLFCYSIKNNLEPKFSYFVVEMGRDLKELIEFPQYFSFSLENRIKPRHKNCVEMGVCFPLPVMLKTKEVKFQSTLEVYVNSSTPLKTSPLWCAGYDFSE* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01271 340 FunFam Transcription termination factor MTEF1, chloroplastic 156 320 - -
Lapu5g01271 340 PANTHER CGI-12 PROTEIN-RELATED 97 321 IPR003690 GO:0003690|GO:0006355
Lapu5g01271 340 Pfam mTERF 79 166 IPR003690 GO:0003690|GO:0006355
Lapu5g01271 340 Pfam mTERF 159 313 IPR003690 GO:0003690|GO:0006355
Lapu5g01271 340 SMART mt_12 200 229 IPR003690 GO:0003690|GO:0006355
Lapu5g01271 340 SMART mt_12 132 163 IPR003690 GO:0003690|GO:0006355
Lapu5g01271 340 SMART mt_12 97 127 IPR003690 GO:0003690|GO:0006355
Lapu5g01271 340 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Lapu5g01271 340 SMART mt_12 168 199 IPR003690 GO:0003690|GO:0006355
Lapu5g01271 340 SMART mt_12 234 266 IPR003690 GO:0003690|GO:0006355
Lapu5g01271 340 Gene3D Transcription termination factor 3, mitochondrial 138 321 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lapu5g01271 mTERF 2.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01271 K15032 - gmx:100794678 614.764