Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01270 ATGCGAAGCTGCATCAACCTCTGGATCGTGGTCGCTCTCGTCGTCCCTGTCCTCCTCTCTCTCAGAAGCCCTCGAGGCGAAACCCAAACCGAAACCACTCCTTCTTCTTCTTCTTCTTCTCCTCCTCCTCCTCCTTCTTTCTCTTATTCTTCTTCCTTCTCCGTAAAGCTTGCCAACACATTCCGCTTCAACCAAAGGATCCGAGACGGCTCCAATCTCGAATACGATTTCTACAGGGACACATGTCCCCAAGCCGAGGGCATTGTCCGTTCAGCGCTCACGCGCATCTACTTCGACCACAGGGACTTTGCTCCTGCCCTGCTTCGTCTCTTCTTCCACGATTGCTTCATCCAGGGTTGTGATGCTTCGTTGCTGTTGGAGGAGAACGATGGTGACAGCAACAGTTCCGTGGAGAAGCAGGCTGTGCCAAATCAGACATTGAGAGGTTTTGACAAAATTGACTTGATAAAGGAGGAGGTGGAGCAAGCATGTCCTGGTGTTGTGTCTTGTGCAGACATAGTTTCACTTGCGGCAAGGGATTCCGTTCTTCTGGCTGGTGGACCGTTCTATCCAGTTTTAACCGGTAGAAGGGACAACCATCAATCGTTTTACGAGGAAGCAAATAATCAGATTCCCAGACCAGATGATAATGTTACACGCACACTGCATCTCTTTAATCTTAAAGGATTTAATGCAAGAGAAACTGTCAGCCTTCTTGGAGGACACAACATTGGCAAAATTGGTTGTGATTTCATTCAACAAAGGCTATACAACTTTCAAGGCACAAGACAGCCAGACCCTAGTATACCTCTTGATTTCCTTCGTCAAATGAGACTAAATTGCCCAAACGGCACGAACACAAATGATAATGAAGATGAATTTGTGACTTCAAAGCCTATGAGTAGTGATGTTCGTTCTAAACAGGGGATGTCATACATGCAAGCATTGTCTTCTGCTGTTTCATCAGGTTCTACATTTGACACTCATTATTACCAAAGCCTGCTAAGAGGAAGAGGATTACTTTTTGCTGATCAACAACTGATGGTCGAGGAGAAAACTGCCAAATTGGTCTCTGCTTATGCTTTGGATGATGGATCAACCTTTCGCATGGACTTTGCCAGGGTGATGTTGAAGATGTCTAATCTTGATGTTTTGACTGGACTTCAAGGTCAGGTTCGACTCAATTGCTCTCTGCCTGTGACTTCTTGA 1209 0.4599 MRSCINLWIVVALVVPVLLSLRSPRGETQTETTPSSSSSSPPPPPSFSYSSSFSVKLANTFRFNQRIRDGSNLEYDFYRDTCPQAEGIVRSALTRIYFDHRDFAPALLRLFFHDCFIQGCDASLLLEENDGDSNSSVEKQAVPNQTLRGFDKIDLIKEEVEQACPGVVSCADIVSLAARDSVLLAGGPFYPVLTGRRDNHQSFYEEANNQIPRPDDNVTRTLHLFNLKGFNARETVSLLGGHNIGKIGCDFIQQRLYNFQGTRQPDPSIPLDFLRQMRLNCPNGTNTNDNEDEFVTSKPMSSDVRSKQGMSYMQALSSAVSSGSTFDTHYYQSLLRGRGLLFADQQLMVEEKTAKLVSAYALDDGSTFRMDFARVMLKMSNLDVLTGLQGQVRLNCSLPVTS* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01270 402 SUPERFAMILY Heme-dependent peroxidases 73 398 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lapu5g01270 402 ProSiteProfiles Plant heme peroxidase family profile. 72 400 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu5g01270 402 CDD secretory_peroxidase 72 397 IPR033905 GO:0004601|GO:0042744
Lapu5g01270 402 FunFam Peroxidase 76 221 - -
Lapu5g01270 402 Pfam Peroxidase 89 361 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu5g01270 402 PANTHER PEROXIDASE 25-RELATED 55 387 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu5g01270 402 Gene3D Peroxidase, domain 2 212 379 - -
Lapu5g01270 402 PRINTS Plant peroxidase signature 317 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu5g01270 402 PRINTS Plant peroxidase signature 106 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu5g01270 402 PRINTS Plant peroxidase signature 374 387 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu5g01270 402 PRINTS Plant peroxidase signature 167 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu5g01270 402 PRINTS Plant peroxidase signature 186 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu5g01270 402 PRINTS Plant peroxidase signature 148 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu5g01270 402 PRINTS Plant peroxidase signature 82 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu5g01270 402 PRINTS Plant peroxidase signature 233 245 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu5g01270 402 PRINTS Plant peroxidase signature 333 350 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu5g01270 402 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu5g01270 402 PRINTS Haem peroxidase superfamily signature 186 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu5g01270 402 PRINTS Haem peroxidase superfamily signature 104 118 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu5g01270 402 PRINTS Haem peroxidase superfamily signature 168 185 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu5g01270 402 PRINTS Haem peroxidase superfamily signature 319 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu5g01270 402 FunFam Peroxidase 212 379 - -
Lapu5g01270 402 ProSitePatterns Peroxidases active site signature. 104 115 IPR019794 GO:0004601
Lapu5g01270 402 Gene3D - 76 397 - -
Lapu5g01270 402 MobiDBLite consensus disorder prediction 25 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01270 Lapu-Chr5 25489496 25491978 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01270 69 397 Peroxidase AT4G33870 45.428 4.94e-95 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01270 K00430 - gmx:100804973 668.692